DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP5A and Myo9a

DIOPT Version :9

Sequence 1:NP_727007.1 Gene:RhoGAP5A / 31473 FlyBaseID:FBgn0029778 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_599162.2 Gene:Myo9a / 171296 RGDID:621395 Length:2626 Species:Rattus norvegicus


Alignment Length:480 Identity:117/480 - (24%)
Similarity:211/480 - (43%) Gaps:71/480 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 PEPSSPVQKVW--------KPELYKLQLEAPAP-----CPLRCQRTL-----PLPPAKSTAEAVE 70
            |.|.|.|..::        .|...:|....|.|     .|..|::..     |.|.|| ....|:
  Rat  1845 PAPQSEVSSLFAGSDVTPVHPFSDELTQYHPTPPLSPELPGSCRKEFKENKEPSPKAK-RKRGVK 1908

  Fly    71 ANNLAGRLYGSEYHGLMGHLEAEQLLANARD----GSYFVRRSPQSDGYYTLSLRFNKRPKHYKL 131
            .:::|       ...:....::.|::|:|.|    ..:.:::....|.      ..:|:.....:
  Rat  1909 ISSVA-------LDSMHWQNDSVQIIASANDLKSMDEFLLKKMNDLDN------EDSKKDTLVDV 1960

  Fly   132 LYKPGVGHYLRGQDKRFDTVHDMVA--DGLINFHMQLHASPIIQQINQQT----KNCYQQSPY-M 189
            ::|..:..:   :...|.:....:|  ||....:..|:|  :.:||.::|    :..:.:||. :
  Rat  1961 VFKKALKEF---RQNIFSSYSSALAMDDGKSIRYKDLYA--LFEQILEKTMRFEQRDWNESPVRV 2020

  Fly   190 TLNGRK--LRALSNELGKAAAKESKESPAEEKEQKQEEPPPPAVDPMPLVYE-KPHHFKVHTFKG 251
            .:|..|  |....||.....:...|....|.|:::::|        ..||.| ..|.||...:..
  Rat  2021 WVNTFKVFLDEYMNEFKTLDSTAPKVLKTERKKRRKKE--------TDLVEEHNGHMFKATQYSI 2077

  Fly   252 LNWCEFCANFLWGFTAQGVKCEACGFVAHSKCSELVPPKCV----PDLKRIRGVFGTDLTTMVQL 312
            ..:||:|::.:|......| |:.|.:..|.||......||.    |:|...:  ||.:|:.:...
  Rat  2078 PTYCEYCSSLIWIMDRASV-CKLCKYACHKKCCLKTTAKCSKKYDPELSSRQ--FGVELSRLTSE 2139

  Fly   313 EPHHQIPFVVRRCVEEVEARGMLQEGIYRVSGFADEIEALKLALDREGEKTDMSETAYGNVNVIA 377
            :  ..:|.||.:.:..:|..|:..|||||.||..::|:.|:..||.:.|..::.:.   |::|||
  Rat  2140 D--RAVPLVVEKLINYIEMHGLYTEGIYRKSGSTNKIKELRQGLDTDAESVNLDDY---NIHVIA 2199

  Fly   378 GTLKLYLRLLPVPLITFQAYPSFMAAGRTGKQAEQRQLMAEAVRRLPPAHHSCLQYMLEHLKRVA 442
            ...|.:||.||.||:||:.|..|:.|....::.|..:.:...:.:|...|.|.|:.::.||.|:|
  Rat  2200 SVFKQWLRDLPNPLMTFELYEEFLRAMGLQERKETIRGVYSVIDQLSRTHLSTLERLIFHLVRIA 2264

  Fly   443 SHYAVNKMNEHNLATVFAPTLIATP 467
            .....|:|:.:.||.||||.::..|
  Rat  2265 LQEDTNRMSANALAIVFAPCILRCP 2289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP5ANP_727007.1 SH2_a2chimerin_b2chimerin 75..166 CDD:198215 12/96 (13%)
C1_1 242..294 CDD:278556 15/55 (27%)
RhoGAP_chimaerin 302..491 CDD:239837 54/166 (33%)
Myo9aNP_599162.2 Actin-binding. /evidence=ECO:0000250 908..919
Neck or regulatory domain. /evidence=ECO:0000250 1022..1163
Tail. /evidence=ECO:0000250 1164..2589 117/480 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1221..1276
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1360..1397
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1562..1602
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1618..1673
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1689..1726
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1765..1784
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1872..1907 8/35 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2365..2385
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2449..2527
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2552..2614
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1453
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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