DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP5A and CHN1

DIOPT Version :9

Sequence 1:NP_727007.1 Gene:RhoGAP5A / 31473 FlyBaseID:FBgn0029778 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_001358443.1 Gene:CHN1 / 1123 HGNCID:1943 Length:476 Species:Homo sapiens


Alignment Length:438 Identity:171/438 - (39%)
Similarity:247/438 - (56%) Gaps:76/438 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 LPLPPAKSTAEAVEANNLAGRLYGSEYHGLMGHLEAEQLLANARDGSYFVRRSPQSDGYYTLSLR 121
            ||.||                    .:||::....|:|||..| :|||.:|.|.:..|.|||:||
Human    61 LPQPP--------------------RFHGMISREAADQLLIVA-EGSYLIRESQRQPGTYTLALR 104

  Fly   122 FNKRPKHYKLLYKPGVGHYLRGQDKRFDTVHDMVADGLINFHMQLHASPIIQQINQQTKN-CYQQ 185
            |..:.::::|.|.   |.:..| :|||:::||:|.||||..:::..|:   :.|.:.|.| .|:.
Human   105 FGSQTRNFRLYYD---GKHFVG-EKRFESIHDLVTDGLITLYIETKAA---EYIAKMTINPIYEH 162

  Fly   186 SPYMTLN-------------------------GRKLRALSNELGKAAAKESKESPAEEKEQKQEE 225
            ..|.|||                         |...:.|::.:.:|..||:::.|.         
Human   163 VGYTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPK--------- 218

  Fly   226 PPPPAVDPMPLVYEKPHHFKVHTFKGLNWCEFCANFLWGFTAQGVKCEACGFVAHSKCSELVPPK 290
                        |||.|:||||||:|.:|||:||||:||..||||||..||...|.:||::||..
Human   219 ------------YEKIHNFKVHTFRGPHWCEYCANFMWGLIAQGVKCADCGLNVHKQCSKMVPND 271

  Fly   291 CVPDLKRIRGVFGTDLTTMVQLEPHHQIPFVVRRCVEEVEARGMLQEGIYRVSGFADEIEALKLA 355
            |.||||.::.|:..||||:|:.....: |.||..|:.|:|:||:..||:||||||:|.||.:|:|
Human   272 CKPDLKHVKKVYSCDLTTLVKAHTTKR-PMVVDMCIREIESRGLNSEGLYRVSGFSDLIEDVKMA 335

  Fly   356 LDREGEKTDMSETAYGNVNVIAGTLKLYLRLLPVPLITFQAYPSFMAAGRTGKQAEQRQLMAEAV 420
            .||:|||.|:|...|.::|:|.|.||||.|.||:||||:.|||.|:.:.:.....||.:.:.||:
Human   336 FDRDGEKADISVNMYEDINIITGALKLYFRDLPIPLITYDAYPKFIESAKIMDPDEQLETLHEAL 400

  Fly   421 RRLPPAHHSCLQYMLEHLKRVASHYAVNKMNEHNLATVFAPTLIATPQ 468
            :.|||||...|:|::.|||||..|...|.||..||..||.|||:.:|:
Human   401 KLLPPAHCETLRYLMAHLKRVTLHEKENLMNAENLGIVFGPTLMRSPE 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP5ANP_727007.1 SH2_a2chimerin_b2chimerin 75..166 CDD:198215 33/90 (37%)
C1_1 242..294 CDD:278556 31/51 (61%)
RhoGAP_chimaerin 302..491 CDD:239837 80/167 (48%)
CHN1NP_001358443.1 SH2 67..145 CDD:387587 33/82 (40%)
C1_1 223..272 CDD:365894 30/48 (63%)
RhoGAP_chimaerin 283..476 CDD:239837 80/167 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165143518
Domainoid 1 1.000 160 1.000 Domainoid score I4064
eggNOG 1 0.900 - - E1_KOG1453
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H31056
Inparanoid 1 1.050 333 1.000 Inparanoid score I2425
Isobase 1 0.950 - 0 Normalized mean entropy S3050
OMA 1 1.010 - - QHG49440
OrthoDB 1 1.010 - - D1300981at2759
OrthoFinder 1 1.000 - - FOG0001164
OrthoInspector 1 1.000 - - otm41742
orthoMCL 1 0.900 - - OOG6_104322
Panther 1 1.100 - - O PTHR46075
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1094
SonicParanoid 1 1.000 - - X2268
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1716.750

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