DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP5A and arhgap12

DIOPT Version :10

Sequence 1:NP_727007.1 Gene:RhoGAP5A / 31473 FlyBaseID:FBgn0029778 Length:494 Species:Drosophila melanogaster
Sequence 2:XP_004915509.1 Gene:arhgap12 / 100493129 XenbaseID:XB-GENE-961971 Length:824 Species:Xenopus tropicalis


Alignment Length:211 Identity:64/211 - (30%)
Similarity:119/211 - (56%) Gaps:16/211 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   293 PDLKRIR-------GVFGTDLTTMVQLEPHHQIPFVVRRCVEEVEARGMLQEGIYRVSGFADEIE 350
            |.::.:|       .|||:.|.::.|.| :..:|..|:.|:|.||.:|:..:|:|||||....|:
 Frog   616 PTMQAVREKGYIKDPVFGSSLASLCQRE-NTTVPNFVKMCIEHVEEQGLDVDGLYRVSGNLAVIQ 679

  Fly   351 ALKLALDREGEKTDMSETAYGNVNVIAGTLKLYLRLLPVPLITFQAYPSFMAAGRTGKQAEQR-Q 414
            .|:.|:..: ||.|::::.:.:::||.|.||::.|.||.||.||..:..|:.|.:  ::.:.| |
 Frog   680 KLRFAVTHD-EKLDLNDSKWEDIHVITGALKMFFRELPEPLFTFSHFNDFVNAIK--QEPKLRVQ 741

  Fly   415 LMAEAVRRLPPAHHSCLQYMLEHLKRVASHYAVNKMNEHNLATVFAPTLIATPQHMTNLT-EEIF 478
            .:.:.:::||..:|..:|.:.:|||:|......|:|...:||.||.|||:.......|:. ..::
 Frog   742 AIKDLIKQLPKPNHDTMQALFKHLKKVVETGEKNRMTYQSLAIVFGPTLLKPESETGNIAIHTVY 806

  Fly   479 ---MLSSLITHCKTIF 491
               ::..::..|.:||
 Frog   807 QNQIVELILLECNSIF 822

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP5ANP_727007.1 SH2_a2chimerin_b2chimerin 75..166 CDD:198215
C1_CHN 241..293 CDD:410356 64/211 (30%)
RhoGAP_chimaerin 302..491 CDD:239837 59/193 (31%)
arhgap12XP_004915509.1 SH3 <26..72 CDD:473055
SH3-WW_linker 69..249 CDD:435468
WW 255..282 CDD:238122
WW 347..372 CDD:459800
PH_ARHGAP9-like 439..545 CDD:270053
RhoGAP_ARHGAP27_15_12_9 632..817 CDD:239868 58/188 (31%)
Blue background indicates that the domain is not in the aligned region.

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