DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP5A and arhgap9

DIOPT Version :9

Sequence 1:NP_727007.1 Gene:RhoGAP5A / 31473 FlyBaseID:FBgn0029778 Length:494 Species:Drosophila melanogaster
Sequence 2:XP_005172184.2 Gene:arhgap9 / 100334461 ZFINID:ZDB-GENE-110510-2 Length:855 Species:Danio rerio


Alignment Length:581 Identity:130/581 - (22%)
Similarity:211/581 - (36%) Gaps:152/581 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 QKVWKPEL------YKLQLEA-PAPCPLRCQRTLPLPPAKSTAEAVEANNLAGRLYGSEYHGLMG 88
            ::.|||..      :..|:.| .|....|..|.|.| |.:||.             .|..|.|..
Zfish   302 ERSWKPPRRARQTNHSQQVNAVHAGTVQRDIRLLSL-PLQSTG-------------SSSMHRLSP 352

  Fly    89 HLEAEQLLANARDGSYFVRRSPQSDGYYTLSLRFNKRPKHYKLLYKPGVGHYLRGQDKRFDTVHD 153
            .|......||....|..::|:..||...:.|..|:..|:....| ..|:.|....        :.
Zfish   353 DLSYISHDANGWQLSQSMQRAASSDALSSASSMFDDTPRRNSAL-SGGMAHISHS--------YS 408

  Fly   154 MV-------ADGLINFHMQLH-----ASPIIQQINQQTKNC-YQQSPYMTLNGRKLRALSNELGK 205
            |:       .:|..::.:.:.     :||..:.:..:.:.. ......:...|||||...|....
Zfish   409 MILPSQRTATNGQSDYRVVVEPPSSDSSPDSEGVTPELEKAGLLNKTKIAEGGRKLRKNWNPSWV 473

  Fly   206 AAAKESKESPAEEKEQKQEEPPPPAVDPMPLV-------------YEKPHHFKVHTFKGLNWCEF 257
            .....|.....:.|.|..|...|....|...|             ..|.:.||:.|..|      
Zfish   474 VLVGNSLVFFKDPKSQNPESWKPGNSRPESSVDLRGAQLQWANDLSSKKNVFKLRTITG------ 532

  Fly   258 CANFL-----------WGFTAQGV-------------------KCEACGFVAHSKCSELVP---- 288
             ..||           |..|.|.|                   :..:...:.||...:.|.    
Zfish   533 -NEFLLQSETDSLIREWYRTIQNVIDRLDKENPLDNVLLYSLRRAGSVELLDHSGDEDEVRGGIK 596

  Fly   289 ---PKCVPDL-----KRIRG------------------------VFGTDLTTMVQLEPHHQIPFV 321
               |:...:|     ||::.                        |||..|..:.:.| ...:|..
Zfish   597 ASLPRSTSNLENSEHKRVKSRLKKLILRRPPLQTLQEKGLIKDQVFGCSLELLCERE-KCTVPQF 660

  Fly   322 VRRCVEEVEARGMLQEGIYRVSGFADEIEALKLALDRE----------------GEKTDMSETAY 370
            ||:|.|.||.:|:..:|||||||....|:.|:.|::.|                .|:.|:.:..:
Zfish   661 VRKCTEAVERKGLETDGIYRVSGNLAVIQKLRFAVNHERAVTTDGRYLFPEALVQERLDLDDPQW 725

  Fly   371 GNVNVIAGTLKLYLRLLPVPLITFQAYPSFMAAGRTGKQAEQRQLMAEAVRRLPPAHHSCLQYML 435
            .:::||.|.|||:.|.||.||:.|.|:..|:.:.:.....|:.:.:...|..||||:...||:|:
Zfish   726 EDIHVITGALKLFFRELPEPLVPFSAFHDFVDSIKIADHLERVERLKMLVLSLPPANQHTLQHMI 790

  Fly   436 EHLKRVASHYAVNKMNEHNLATVFAPTLIATPQHMT-----NLTEEIFMLSSLITHCKTIF 491
            .||:||......|:|:..|:..||.|||: .|::.:     |:..:...:.:|::..:.||
Zfish   791 RHLRRVMERSDSNRMSTQNIGIVFGPTLM-RPENESGNMAFNMVYQNQAIETLLSQYQHIF 850

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP5ANP_727007.1 SH2_a2chimerin_b2chimerin 75..166 CDD:198215 18/97 (19%)
C1_1 242..294 CDD:278556 14/88 (16%)
RhoGAP_chimaerin 302..491 CDD:239837 63/209 (30%)
arhgap9XP_005172184.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1300981at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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