DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP5A and si:zfos-588f8.1

DIOPT Version :10

Sequence 1:NP_727007.1 Gene:RhoGAP5A / 31473 FlyBaseID:FBgn0029778 Length:494 Species:Drosophila melanogaster
Sequence 2:XP_068072341.1 Gene:si:zfos-588f8.1 / 100332329 ZFINID:ZDB-GENE-110411-111 Length:2243 Species:Danio rerio


Alignment Length:421 Identity:99/421 - (23%)
Similarity:170/421 - (40%) Gaps:104/421 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 EANNLAGRLYGSEYHGLMGHLEAEQLLANARDGSYFVRRSPQSDGYYTLSLRFNKRPKHYKLLYK 134
            :.|:|..|  |.:..|      .||:..||                   :::|.:..|....:.|
Zfish  1612 QVNDLRSR--GKQLSG------TEQIFINA-------------------TMQFRENIKGMYSISK 1649

  Fly   135 PGVGHYLRGQDKRFDTVHDMVADGLINFHM----------QLHASPIIQQINQQTKNCYQQSPYM 189
            |.:|:                 ..|:|.:.          |....|::..:.|...:.:      
Zfish  1650 PQIGY-----------------KALMNSYQNKVIILATEKQKGEVPLVVNLFQSVLDIF------ 1691

  Fly   190 TLNGRKLRALSNELGKAAAKESKESPAEEKEQKQEEPPPPAVDPMPLVYEKPH---HFKVHTFKG 251
                  :||   |:.|..|:.:|.....:..:|:.:....|:|         |   |::|:..:.
Zfish  1692 ------IRA---EIKKEEAEPAKPPKGRKMRKKKGKGLENALD---------HVFTHYQVNIMQS 1738

  Fly   252 LNWCEFCANFLWGFTAQGVKCEACGFVAHSK--------CSELVPPKC--VPDLKRIRGVFGTDL 306
               |:.|.:::||. .:...|..|..|.|.|        ||.....||  .|....    ||..:
Zfish  1739 ---CDQCTSYIWGM-EKAYMCSYCKMVCHKKCICKIVTDCSTFSSKKCEDEPGSNH----FGVRV 1795

  Fly   307 TTMVQLEPHHQIPFVVRRCVEEVEARGMLQEGIYRVSGFADEIEALKLALDREGEKTDMSETAYG 371
            ..:|..:.  .:|.|:...:|.||..|:..|||||.||.|:.::.|...|:...|...:.:..  
Zfish  1796 GNLVNNKT--PVPIVLEIMLEHVEMNGLYTEGIYRKSGSANRMKELHQLLEAGPENVCLEDYP-- 1856

  Fly   372 NVNVIAGTLKLYLRLLPVPLITFQAYPSFMAAGRTGKQAEQRQLMAEAVRRLPPAHHSCLQYMLE 436
             ::.:.|.:|.:||.||.||:||..|..|:.|....::.||.|.:...:.:||.|:.:.|:.::.
Zfish  1857 -IHAVTGLVKQWLRELPEPLMTFTHYNDFLYAIELPEKQEQLQAIYRVLEQLPTANFNTLERLIF 1920

  Fly   437 HLKRVASHYAVNKMNEHNLATVFAPTLIATP 467
            ||.|||.....|:|..::||.||||.::..|
Zfish  1921 HLVRVAKEEKSNRMTPNSLAIVFAPCILRCP 1951

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP5ANP_727007.1 SH2_a2chimerin_b2chimerin 75..166 CDD:198215 14/100 (14%)
C1_CHN 241..293 CDD:410356 16/64 (25%)
RhoGAP_chimaerin 302..491 CDD:239837 54/166 (33%)
si:zfos-588f8.1XP_068072341.1 Ubl1_cv_Nsp3_N-like 16..111 CDD:475130
MYSc_Myo9 160..926 CDD:276836
PTZ00121 <998..1431 CDD:173412
C1 1721..1778 CDD:412127 16/69 (23%)
RhoGAP_myosin_IXB 1791..1976 CDD:239872 54/166 (33%)
Blue background indicates that the domain is not in the aligned region.

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