DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP5A and arhgap45

DIOPT Version :9

Sequence 1:NP_727007.1 Gene:RhoGAP5A / 31473 FlyBaseID:FBgn0029778 Length:494 Species:Drosophila melanogaster
Sequence 2:XP_012822956.2 Gene:arhgap45 / 100125789 XenbaseID:XB-GENE-990078 Length:1114 Species:Xenopus tropicalis


Alignment Length:444 Identity:112/444 - (25%)
Similarity:178/444 - (40%) Gaps:135/444 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 NFHMQLHASPI---------------------IQQIN--QQTKNCYQQSPYM-------TLNGRK 195
            :.|||....|:                     ::|:.  .:.:..|...||.       .:..||
 Frog   497 SMHMQTAPLPVGFQTLCESSKLYDLGQQYASYVRQLGAVNEPETTYDFQPYTPQITWSPCIRSRK 561

  Fly   196 LRALSNELGKAAAKESKESPAEEK---------EQKQEEPP------PPAV-------------- 231
            ....|.::   .:.|:||...||:         .|..:..|      .|||              
 Frog   562 SSFNSQDI---PSSENKEISGEERVVERRGGRGHQVHKSWPTAITEGDPAVSNTGTAFPEKLHQP 623

  Fly   232 -DPMPLVYEK-------------------PHH---FK---------VHTFKGL---NWCEFCANF 261
             .|:.:|.:|                   ||.   |:         .|..:.|   :.|..|.::
 Frog   624 SSPIDIVDQKRLSASFEQSINGLSGSLEVPHSTGPFRNIGLSRAALTHRLRKLRTPSKCRECNSY 688

  Fly   262 LWGFTAQGVKCEACGFVAHSKCSELVPPKCVPDLKRIRG---VFGTDLTTMVQLEPHHQIPFVVR 323
            ::   .||.:||.|....|.||.|.:..:|  ..|:::|   :||.|.:......|.| |||::|
 Frog   689 VY---FQGAECEECSLACHKKCLETLAIQC--GHKKLQGRLLLFGRDFSETALRSPDH-IPFLIR 747

  Fly   324 RCVEEVEARGMLQEGIYRVSGFADEIEALKLALDREGEKTDMSETAYGNVNVIAGTLKLYLRLLP 388
            :||.|:|.|.:..:|||||:|....:|.|..|.:...|..::|:   .:.:.::..||||||.||
 Frog   748 KCVSEIEERALTMKGIYRVNGVKTRVEKLCQAFENGKELVELSQ---ASPHDLSNVLKLYLRQLP 809

  Fly   389 VPLITFQAYPSFMAAGR-------TGK---------QAEQRQL-----MAEAVRRLPPAHHSCLQ 432
            .|||.|:.|...|...:       |||         ..|...|     :.|.::.||..:.:.||
 Frog   810 EPLIPFRLYNGLMGLAKESLRGIETGKGSRLQDKGPNTEPEVLSMVVQLKELLQDLPVENRTTLQ 874

  Fly   433 YMLEHLKRVASHYAVNKMNEHNLATVFAPTLIATPQHMTNLTEEIFMLSSLITH 486
            |:::||.||:....:|||:..||..||.|.|: .|:.    |:....||||:.:
 Frog   875 YLVKHLCRVSEQEQLNKMSPSNLGIVFGPALM-RPRP----TDATVSLSSLVDY 923

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP5ANP_727007.1 SH2_a2chimerin_b2chimerin 75..166 CDD:198215 2/4 (50%)
C1_1 242..294 CDD:278556 16/66 (24%)
RhoGAP_chimaerin 302..491 CDD:239837 69/206 (33%)
arhgap45XP_012822956.2 PRK12495 <22..151 CDD:183558
BAR 289..515 CDD:416402 4/17 (24%)
C1_GMIP-like 669..719 CDD:410366 14/54 (26%)
RhoGAP 727..936 CDD:413382 69/206 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1300981at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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