DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP5A and arhgap23a

DIOPT Version :10

Sequence 1:NP_727007.1 Gene:RhoGAP5A / 31473 FlyBaseID:FBgn0029778 Length:494 Species:Drosophila melanogaster
Sequence 2:XP_003198196.2 Gene:arhgap23a / 100006233 ZFINID:ZDB-GENE-121019-1 Length:1845 Species:Danio rerio


Alignment Length:328 Identity:83/328 - (25%)
Similarity:135/328 - (41%) Gaps:72/328 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   175 INQQTKNCYQQSPYMTLNGRK------LRALSNELGKAAAKESKESPAEEKEQKQEEPPPPAVDP 233
            ||::..:..:|||    .|.|      :..::..|.|   .::...|...|.:.::|..||    
Zfish  1066 INKKLNDYRKQSP----TGNKPDSSPRVHRMTFLLSK---PDNSAPPRSPKHEAKDESSPP---- 1119

  Fly   234 MPLVYEKPHHFKVHTFKGLNWCEFCANFLWGFTAQGVKCEACGFVAHSKCSELVPPKCVPDLKRI 298
                 :.|                     ||....             |.|:...||        
Zfish  1120 -----KSP---------------------WGINIM-------------KKSKKAGPK-------- 1137

  Fly   299 RGVFGTDLTTMVQLEPHHQIPFVVRRCVEEVEARGMLQEGIYRVSGFADEIEALKLALDREGEKT 363
              .||..|........:..||.:|..|...||..|:...|||||.|....:.:|:..|:: |...
Zfish  1138 --AFGVRLEDCQPAVNNKFIPQIVEICCGLVEDMGLEYTGIYRVPGNNAVVSSLQEQLNK-GVDI 1199

  Fly   364 DMSETAYGNVNVIAGTLKLYLRLLPVPLITFQAYPSFMAAGRTGKQAEQRQLMAEAVRRLPPAHH 428
            :::|..:.::||::..||.:.|.||.||.|...|..|:.|.|....:::.:.|.:.:|.||..:.
Zfish  1200 NITEEKWQDLNVVSSLLKSFFRKLPEPLFTDDKYNDFIDANRMENASDRLRTMKKLIRDLPDHYF 1264

  Fly   429 SCLQYMLEHLKRVASHYAVNKMNEHNLATVFAPTLIATPQH-----MTNLTEEIFMLSSLITHCK 488
            ..|::::.|||.||.|...|||...|||.||.|||:.|.:.     :|::.:...::.:||.|..
Zfish  1265 HTLKFLVGHLKTVADHSEKNKMEPRNLALVFGPTLVRTSEDNMTDMVTHMPDRYKIVETLIQHYT 1329

  Fly   489 TIF 491
            ..|
Zfish  1330 WFF 1332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP5ANP_727007.1 SH2_a2chimerin_b2chimerin 75..166 CDD:198215
C1_CHN 241..293 CDD:410356 7/51 (14%)
RhoGAP_chimaerin 302..491 CDD:239837 61/193 (32%)
arhgap23aXP_003198196.2 PDZ_ARHGAP21_23-like 116..224 CDD:467238
PH_ARHGAP21-like 938..1054 CDD:269955
RhoGAP_ARHGAP21 1138..1332 CDD:239860 61/194 (31%)
Blue background indicates that the domain is not in the aligned region.

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