DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34435 and cmlc1

DIOPT Version :10

Sequence 1:NP_572233.2 Gene:CG34435 / 31471 FlyBaseID:FBgn0085464 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_571767.2 Gene:cmlc1 / 64671 ZFINID:ZDB-GENE-030522-1 Length:196 Species:Danio rerio


Alignment Length:195 Identity:45/195 - (23%)
Similarity:79/195 - (40%) Gaps:44/195 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 KQSEL-MRMLP------EIPKLRNIFDLFVVNECDQAAGGEDVAAPTCLDLGIGIRMTDVADCLR 75
            |:.|: ::.:|      :|.:.|:.|.||     |:...||           :.||.....|.:|
Zfish    34 KEPEVDLKSVPLDFSPDQIEEFRDAFTLF-----DETPTGE-----------MKIRYAQCGDVMR 82

  Fly    76 IMGLNPSDDELQQRLEEHVRRRESLGMGMKKIAQRAT----FELVLTLYCQLAEQEVKEMAKGCI 136
            .:|.||::.::...|            |..|..:..|    ||..|.:.     |.:........
Zfish    83 ALGHNPTNADVLTVL------------GKPKAEEMNTKYLDFETFLPML-----QHISRAKDQGT 130

  Fly   137 VENVLRVLRSRDSAGTGMLPYSQLRHLLTTMGNRLDETEVYGVLHRAADINGNVLYEHLVHQLFA 201
            .|:.:..||..|..|.|.:..::|||:|.|:|.::.|.||..::....|.||.:.|...:..:.:
Zfish   131 FEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEDEVDRLMAGQEDANGCINYTSFIKHILS 195

  Fly   202  201
            Zfish   196  195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34435NP_572233.2 PTZ00184 <74..196 CDD:185504 31/125 (25%)
cmlc1NP_571767.2 PTZ00184 48..195 CDD:185504 42/179 (23%)

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