DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34435 and myl13

DIOPT Version :9

Sequence 1:NP_572233.2 Gene:CG34435 / 31471 FlyBaseID:FBgn0085464 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_956810.1 Gene:myl13 / 393488 ZFINID:ZDB-GENE-040426-1593 Length:186 Species:Danio rerio


Alignment Length:174 Identity:42/174 - (24%)
Similarity:70/174 - (40%) Gaps:29/174 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 EIPKLRNIFDLFVVNECDQAAGGEDVAAPTCLDLGIGIRMTDVADCLRIMGLNPSDDELQQRLEE 92
            :|...::.|.||     |:....|           :.|......|.:|.:|.||::.|:.     
Zfish    41 QIEDFKDAFQLF-----DRTPTNE-----------MKITFAQCGDLIRALGQNPTNAEVL----- 84

  Fly    93 HVRRRESLGMGMKKIAQRATFELVLTLYCQLAEQEVKEMAKGCIVENVLRVLRSRDSAGTGMLPY 157
            ||       :|..|........|....:..:.:...|...:|.. |:.:..||..|..|.|.:..
Zfish    85 HV-------LGKPKPEDMQVKMLDFDQFLPMHQHICKAKDRGTF-EDFVEGLRVFDKEGNGTVMG 141

  Fly   158 SQLRHLLTTMGNRLDETEVYGVLHRAADINGNVLYEHLVHQLFA 201
            ::|||:|.|:|.::.|.||..::....|.||.:.||..|..:.|
Zfish   142 AELRHVLATLGEKMKEDEVEQLMAGQEDANGCINYEAFVKHIMA 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34435NP_572233.2 FRQ1 17..205 CDD:227455 42/174 (24%)
FRQ1 <188..297 CDD:227455 5/14 (36%)
myl13NP_956810.1 PTZ00184 34..185 CDD:185504 41/172 (24%)
EFh 123..184 CDD:238008 20/60 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0030
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23048
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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