Protein Alignment Vsx1 and vsx2

DIOPT Version :10

• Sequence 1: NP_572232.2
• Gene: Vsx1 / 31470
• FlyBaseID: FBgn0263511
• Length: 837
• Species: Drosophila melanogaster
• Sequence 2: XP_005158862.2
• Gene: vsx2 / 796163
• ZFINID: ZDB-GENE-001222-1
• Length: 393
• Species: Danio rerio
• Alignment Length: 356
• Identity: 131/356 - (36%)
• Similarity: 165/356 - (46%)
• Gaps: 123/356 - (34%)

  Fly   346 AHAHAHHAEAFLGAAG-GAGGNPNSLLAAHGGDVLVGPGG------------------------- 384
            |.||...:.:.||.|| |.|          .|..|:||||
Zfish    71 AGAHLLASRSMLGPAGVGVG----------VGMGLIGPGGIPSFYSQPAFLEVLSDAQNVHLQPL 125

  Fly   385 ---TGP---------------------------GGKKKNKRRHGRTIFTSSQLEELEKAFKEAHY 419
               .||                           ..||:.|||| ||||||.|||||||||.||||
Zfish   126 SRTVGPLEHNQSASSDSDDVSSSERKMSKSSLSQSKKRKKRRH-RTIFTSYQLEELEKAFNEAHY 189

  Fly   420 PDVSARELLSMKTGLAEDRIQVWYQNRRAKWRKTEKCWGHSTKMAEYGLYGAMVRHSLPLPETII 484
            |||.|||:|:|||.|.|||||||:|||||||||.|||||.|:.||||||||||||||:||||:|:
Zfish   190 PDVYAREMLAMKTELPEDRIQVWFQNRRAKWRKREKCWGRSSVMAEYGLYGAMVRHSIPLPESIL 254

  Fly   485 KSAKED--ESVAPWLL---------------------GMHKKSLEAAELLKSDESD-RETPTSDD 525
            ||||:.  :|.|||||                     ||||||||.|....:::|| .:|||:..
Zfish   255 KSAKDGIMDSCAPWLLVQDGFPTTSCFSKHEYPPFFAGMHKKSLETAGHQSNEKSDVTQTPTNPK 319

  Fly   526 TNTSYSAGSTHNSPISSFSISRLLFDAPPPAAGSAGGKGHHHHHHHHKGHHHAHVHAQAQAHAHM 590
            .:.:.:......||:|...:                           :.:..|.:.|:||.|:..
Zfish   320 PDEAEAEERRTESPMSKEEL---------------------------RENSIAALRAKAQEHSAK 357

  Fly   591 LLHHQQQQQQQQQQQQHHHHLHAAENSLQQQ 621
            :|     .....::.:|:....|.|....:|
Zfish   358 VL-----GTVSSERLEHNMETTATEEKSSEQ 383

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vsx1	NP_572232.2	Homeodomain	395..452	CDD:459649	47/56 (84%)
vsx2	XP_005158862.2	None