DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vsx1 and PROP1

DIOPT Version :10

Sequence 1:NP_572232.2 Gene:Vsx1 / 31470 FlyBaseID:FBgn0263511 Length:837 Species:Drosophila melanogaster
Sequence 2:NP_006252.4 Gene:PROP1 / 5626 HGNCID:9455 Length:226 Species:Homo sapiens


Alignment Length:104 Identity:49/104 - (47%)
Similarity:60/104 - (57%) Gaps:13/104 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   363 AGGNPNS-----------LLAAHGGDVLVGPGGTGPGGKKKNKRRHGRTIFTSSQLEELEKAFKE 416
            |.|.|.:           |..|.||.....|.| |..|:..::||| ||.|:..|||:||.||..
Human    28 ATGTPTTTVDSSAPPCRRLPGAGGGRSRFSPQG-GQRGRPHSRRRH-RTTFSPVQLEQLESAFGR 90

  Fly   417 AHYPDVSARELLSMKTGLAEDRIQVWYQNRRAKWRKTEK 455
            ..|||:.|||.|:..|||:|.|||||:||||||.||.|:
Human    91 NQYPDIWARESLARDTGLSEARIQVWFQNRRAKQRKQER 129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vsx1NP_572232.2 Homeodomain 395..452 CDD:459649 35/56 (63%)
PROP1NP_006252.4 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..75 15/48 (31%)
Homeodomain 70..126 CDD:459649 35/56 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 196..226
Blue background indicates that the domain is not in the aligned region.

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