DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vsx1 and hesx1

DIOPT Version :10

Sequence 1:NP_572232.2 Gene:Vsx1 / 31470 FlyBaseID:FBgn0263511 Length:837 Species:Drosophila melanogaster
Sequence 2:NP_001016712.1 Gene:hesx1 / 549466 XenbaseID:XB-GENE-483193 Length:186 Species:Xenopus tropicalis


Alignment Length:60 Identity:30/60 - (50%)
Similarity:40/60 - (66%) Gaps:0/60 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   396 RHGRTIFTSSQLEELEKAFKEAHYPDVSARELLSMKTGLAEDRIQVWYQNRRAKWRKTEK 455
            |..||.||.||:|.||..|:...||.:..||.|:.|..|.|||||:|:||||||.:::.:
 Frog   110 RRPRTAFTRSQIEILENVFRVNSYPGIDIREELAGKLALDEDRIQIWFQNRRAKLKRSHR 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vsx1NP_572232.2 Homeodomain 395..452 CDD:459649 30/55 (55%)
hesx1NP_001016712.1 Homeodomain 110..166 CDD:459649 30/55 (55%)

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