DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vsx1 and PAX7

DIOPT Version :10

Sequence 1:NP_572232.2 Gene:Vsx1 / 31470 FlyBaseID:FBgn0263511 Length:837 Species:Drosophila melanogaster
Sequence 2:NP_002575.1 Gene:PAX7 / 5081 HGNCID:8621 Length:520 Species:Homo sapiens


Alignment Length:228 Identity:69/228 - (30%)
Similarity:97/228 - (42%) Gaps:79/228 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   372 AAHGGDVLVGPGG----------TGPGGKKKNKRRHGRTIFTSSQLEELEKAFKEAHYPDVSARE 426
            |.|..|.::|..|          :.|....|.|:|..||.||:.|||||||||:..||||:..||
Human   184 AKHSIDGILGDKGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 248

  Fly   427 LLSMKTGLAEDRIQVWYQNRRAKWRKTE-----KCWGH-------------------------ST 461
            .|:.:|.|.|.|:|||:.||||:|||..     ..:.|                         :|
Human   249 ELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTGMPTLPPYQLPDSTYPTT 313

  Fly   462 KMAEYGLYGAMVRHSLPLPETIIKSAKEDESVAPWLLGMHKKSLEAAELLKSDESDRETPTSDDT 526
            .:::.|  |:.|....|||.:.                ||:..|.||            ..:.||
Human   314 TISQDG--GSTVHRPQPLPPST----------------MHQGGLAAA------------AAAADT 348

  Fly   527 NTSYSAGSTHNSPISSFSISRLLFDAPPPAAGS 559
            :::|  |:.|:  .||:|.|.:     .|||.|
Human   349 SSAY--GARHS--FSSYSDSFM-----NPAAPS 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vsx1NP_572232.2 Homeodomain 395..452 CDD:459649 33/56 (59%)
PAX7NP_002575.1 paired box domain 34..164
PAX 34..163 CDD:238076
octapeptide 86..93
paired homeodomain 217..275 34/57 (60%)
Homeodomain 218..274 CDD:459649 33/55 (60%)
Pax7 347..385 CDD:403540 13/35 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 389..409
Blue background indicates that the domain is not in the aligned region.

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