DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vsx1 and eyg

DIOPT Version :9

Sequence 1:NP_001284898.1 Gene:Vsx1 / 31470 FlyBaseID:FBgn0263511 Length:837 Species:Drosophila melanogaster
Sequence 2:NP_001014582.1 Gene:eyg / 39419 FlyBaseID:FBgn0000625 Length:670 Species:Drosophila melanogaster


Alignment Length:899 Identity:211/899 - (23%)
Similarity:298/899 - (33%) Gaps:353/899 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 PTAN------TPANGSLSAVQQQQQQQQQQQQQQQQLQQQQQQAIDSLRESRSISPDVSRLSAAA 102
            ||.|      |.||..|||...:.:...|:                    ..|::|..|.::||:
  Fly     5 PTLNRDLGSLTVANSGLSAAHWKMEPHPQR--------------------ITSLAPHASSVAAAS 49

  Fly   103 AAAAAAAAHCQLPVFNPANFYAAAGYAAAADPGNAAAAHHHHMTTLAAAAYLRGFLPPGF----S 163
            .||||||              |||..||||..|:.|.|.....|:.:..:..   :||||    |
  Fly    50 VAAAAAA--------------AAAAAAAAAGAGSGAVAGGGGATSTSPTSVQ---IPPGFGGGGS 97

  Fly   164 T---PHEFRGH--------FQQHFGAQFAEQAAARGQEYASSLANASGDEQSPSKNSSSSGNGGS 217
            |   ||...|.        ..||...:|:.....||.:.|..:....|   :.||...|....|.
  Fly    98 TGGIPHGAGGPTGSTLNTLMSQHRLLEFSRFGGLRGYDIAQHMLTQQG---AVSKLLGSLRPPGL 159

  Fly   218 GGSGSGSGGGNPTSNGLGHLGSPTA------------------------SNGGSGGGAGVGGSGG 258
                  .||..|      .:.:||.                        |.       ||..:..
  Fly   160 ------IGGSKP------KVATPTVVSKIEQYKRENPTIFAWEIRERLISE-------GVCTNAT 205

  Fly   259 GSGTSGSN---------------SSTSGNG---------GN------GGSSGSRSSPAGPHHSAA 293
            ....|..|               :.|:..|         |:      |...|.:..|..|..||.
  Fly   206 APSVSSINRILRNRAAERVATEFARTAAYGLYPPPPHPYGSFTWHPAGNVPGGQGVPPPPPPSAL 270

  Fly   294 LAAHQHAAAAAAAAHHHAAAAAAAHHAHHAHAQAHAHAHAHVHAHAAHAAHAAHAHAHHAEAFLG 358
                 .:.||...|:...:||:|                  |......:..:||.          
  Fly   271 -----WSVAAPTLANLPPSAASA------------------VPVSTCGSLSSAHL---------- 302

  Fly   359 AAGGAGGNPNSLLAAHGGDVLVGPG-GTGPGGKKKNKRRH----------------GRTIFTSSQ 406
            .||||||.|.:.        .:.|| |:....:..::.||                .||.|:..|
  Fly   303 MAGGAGGTPTNR--------AISPGSGSHDTLESADENRHIDSDYLDDDDEPKFRRNRTTFSPEQ 359

  Fly   407 LEELEKAFKEAHYPDVSARELLSMKTGLAEDRIQVWYQNRRAKWRKTEKCWGHSTKMAEYGLYGA 471
            ||||||.|.::|||.||.||.||.:|.|:|.|:|||:.|||||||:.::.               
  Fly   360 LEELEKEFDKSHYPCVSTRERLSSRTSLSEARVQVWFSNRRAKWRRHQRM--------------- 409

  Fly   472 MVRHSLPLPETIIKSAKEDESVAPWLLGMHKKSLEAAELLKSDESDRETPTSDDTNTSYSAGSTH 536
                      .::|                ::....|..|.|.:|: :.|.|..|.:::|:.|| 
  Fly   410 ----------NLLK----------------RQRSSPANPLHSQQSN-DAPASSPTPSNHSSAST- 446

  Fly   537 NSPISSFSISR----LLFD----APPPAA------GSAGGKGHHHHHHHHKGHHHAHVHAQAQAH 587
            ::|::.....:    |..|    .|||:.      |..|  ||||||..|...|.|         
  Fly   447 SAPVAPVPPPQQPLPLCGDHSPQGPPPSVLLHPLHGPPG--GHHHHHPLHLPTHPA--------- 500

  Fly   588 AHMLLHHQQQQQQQQQQQQHHHHLHAAENSLQQQQVAGTGSGSGSGSGSGTGAGSTGPPAHHPYN 652
            |..||.|..|||||||||||                                             
  Fly   501 ALQLLSHYHQQQQQQQQQQH--------------------------------------------- 520

  Fly   653 QQQHLHHLQQLQQQQQQQQQQAQQQQQHHHHQHHHSVHHMHHHNAAAGYAEAAVAAAAAAAAVAA 717
                          ||||||..|||||......:.:.:|:    :..|...|..:..::.:|.|.
  Fly   521 --------------QQQQQQHHQQQQQLSPSGCNPAANHL----SMGGERSAFRSLVSSPSAAAF 567

  Fly   718 AANARNAAAAAAVAAASASASAAVTIAESEAEEEQDDIEDMELDKDCEVEEDVEPVDNDTNTNNE 782
            ...||..|.|           |::|:||.:..........:        ....|....:|||...
  Fly   568 LGLARQYAVA-----------ASLTVAEEQRSRLHYSAGGL--------GSGGEGTGPNTNTTQS 613

  Fly   783 HDNECDADADVEADVDADADADPEIDICDDHDEEMRLQEQLLLKVKQEQAHLGS 836
            ..:....|       ::.:|:|.||::.||.|.|:........||    |.|.|
  Fly   614 GGSTMTVD-------NSSSDSDEEINVHDDSDGEIESSAATAAKV----ARLSS 656

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vsx1NP_001284898.1 Homeobox 399..451 CDD:278475 32/51 (63%)
eygNP_001014582.1 HTH 120..217 CDD:304362 20/118 (17%)
Homeobox 352..404 CDD:278475 32/51 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450809
Domainoid 1 1.000 55 1.000 Domainoid score I4097
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.930

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