Protein Alignment Vsx1 and gsb

DIOPT Version :9

• Sequence 1: NP_001284898.1
• Gene: Vsx1 / 31470
• FlyBaseID: FBgn0263511
• Length: 837
• Species: Drosophila melanogaster
• Sequence 2: NP_523863.1
• Gene: gsb / 38005
• FlyBaseID: FBgn0001148
• Length: 427
• Species: Drosophila melanogaster
• Alignment Length: 281
• Identity: 69/281 - (24%)
• Similarity: 107/281 - (38%)
• Gaps: 82/281 - (29%)

  Fly   362 GAGGNPNSLLAAHGGDVLVGPGGTG-------------PGGKKKNKRRHGRTIFTSSQLEELEKA 413
            |:.|:..|    |..|.::| ||.|             |..:.|.|:|..||.|::.|::.||:.
  Fly   144 GSSGSGTS----HSIDGILG-GGAGSVGSEDESEDDAEPSVQLKRKQRRSRTTFSNDQIDALERI 203

  Fly   414 FKEAHYPDVSARELLSMKTGLAEDRIQVWYQNRRAKWRK-------------------------- 452
            |....||||..||.|:..|||.|.|:|||:.||||:.||
  Fly   204 FARTQYPDVYTREELAQSTGLTEARVQVWFSNRRARLRKQLNTQQVPSFAPTSTSFGATPTTSAA 268

  Fly   453 ----------TEKCWGHSTKMAEYGLYGAMVRHSLPLPET----------IIKSAKEDESVAPWL 497
                      :.:.|..|.....:..||..|....|...|          :...|::..:.:.::
  Fly   269 PAPNMGMSLYSSQSWPSSGAYENHAAYGGSVASMSPASSTSGTSSAAHSPVQTQAQQPGTGSEFM 333

  Fly   498 LGMHKKSLEAAELLKSDESDRETPTSDDTN------TSYSAGSTHNSPISSFSISRLLFDAPPPA 556
            ...:......|....:..|..:||.:....      ::.::||.|.|...|::.:...|   |||
  Fly   334 TSTYGVGSSNATYPSAAYSMPQTPATSAEQLRSQFASAAASGSHHPSTWDSYNFAGSFF---PPA 395

  Fly   557 AGSAGGKGHHHHHHHHKGHHH 577
              ||.|       :|..|:||
  Fly   396 --SAAG-------NHISGYHH 407

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vsx1	NP_001284898.1	Homeobox	399..451	CDD:278475	26/51 (51%)
gsb	NP_523863.1	PAX	19..143	CDD:128645
		homeodomain	186..243	CDD:238039	28/56 (50%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45450958
Domainoid	1	1.000	55	1.000	Domainoid score	I4097
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.840