Protein Alignment Vsx1 and bsh

DIOPT Version :10

• Sequence 1: NP_572232.2
• Gene: Vsx1 / 31470
• FlyBaseID: FBgn0263511
• Length: 837
• Species: Drosophila melanogaster
• Sequence 2: NP_477350.2
• Gene: bsh / 35266
• FlyBaseID: FBgn0000529
• Length: 429
• Species: Drosophila melanogaster
• Alignment Length: 462
• Identity: 98/462 - (21%)
• Similarity: 157/462 - (33%)
• Gaps: 93/462 - (20%)

  Fly   114 LPVFNPANFYAAAGYAAAADPGNAAAAHHHHMTTLAAAAYLRGFLPPGFSTPHEFRGHFQQHFGA 178
            :.:.|.|:...|..:|.|    ||....|.....:|:|..:.....| ||..|..   ||
  Fly     1 MAMLNEASLSPADAHAHA----NATTPTHSKAAAMASATTMLTTKTP-FSIEHIL---FQ----- 52

  Fly   179 QFAEQAAARGQEYASSLANASGDEQSPSKNS----------SSSGNGGSGGSGSGSGGGNPTSNG 233
                           :|.:||.:..|...|.          .||.|.......:.:...||..:.
  Fly    53 ---------------NLNSASNNNNSSDTNGIAANTNNYAPKSSRNAVKSARSAFAHDNNPHKHP 102

  Fly   234 LGHLGSPTASNGGSGGGAGVGGSGGGSGTSGSNSSTSGNGGNGGSSGSRSSPAGPHHSAALAAHQ 298
            ..|...|.:....|       .|...:.|:.||.:.||..|........|:|...|||....:|.
  Fly   103 SQHSHPPQSHPPAS-------ASASATATARSNQAASGYAGEDYGKSMHSTPRSNHHSRHGTSHY 160

  Fly   299 HAAAAAAAAHHHAAAAAAAHHAHHAHAQAHAHAHAHVHAHAA--------HAAHAAHAHAHHAEA 355
            :....:     ....:.||.|......|........::..:.        :|.:..|........
  Fly   161 NGDQIS-----QQLGSGAAQHPPVPTTQPQPPPPPPLNGGSGASNGVLYPNAPYTDHGFLQMTLG 220

  Fly   356 FLGAAGGA--GGNPNSLLAA--HGGDVLVG-PG---------GTGPGGKKKNKRRHGRTIFTSSQ 406
            :|..:.|.  ..:|..|..|  .||....| ||         |.|....:..:||..||:|:..|
  Fly   221 YLSPSSGTYKSVDPYFLSQASLFGGAPFFGAPGCVPELALGLGMGVNALRHCRRRKARTVFSDPQ 285

  Fly   407 LEELEKAFKEAHYPDVSARELLSMKTGLAEDRIQVWYQNRRAKWRKTEKCWGHSTKMAEYGLYGA 471
            |..|||.|:...|.....|..|:...||:|.:::.|:||||.|.:|..:...::.:..::.
  Fly   286 LSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQLRRRDNANEPVDFS---- 346

  Fly   472 MVRHSLP--LPETIIKSAKEDE--SVAPWLLGMHKKSLEAAELLK----------SDESDRETPT 522
               .|.|  .|.....|:.:.:  .:.|..:|.......:.:.|:          .|.||.|..:
  Fly   347 ---RSEPGKQPGEATSSSGDSKHGKLNPGSVGGTPTQPTSEQQLQMCLMQQGYSTDDYSDLEADS 408

  Fly   523 SDDTNTS 529
            .|:.|:|
  Fly   409 GDEDNSS 415

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vsx1	NP_572232.2	Homeodomain	395..452	CDD:459649	23/56 (41%)
bsh	NP_477350.2	Homeodomain	275..331	CDD:459649	22/55 (40%)