Protein Alignment Vsx1 and prd

DIOPT Version :9

• Sequence 1: NP_001284898.1
• Gene: Vsx1 / 31470
• FlyBaseID: FBgn0263511
• Length: 837
• Species: Drosophila melanogaster
• Sequence 2: NP_723721.1
• Gene: prd / 34629
• FlyBaseID: FBgn0003145
• Length: 613
• Species: Drosophila melanogaster
• Alignment Length: 440
• Identity: 107/440 - (24%)
• Similarity: 153/440 - (34%)
• Gaps: 133/440 - (30%)

  Fly   359 AAGGAGGNPNSLLAAHGGDVLVGPGGTG-------------PGGKKKNKRRHGRTIFTSSQLEEL 410
            |:|...|:.....::.|.||..|....|             ||...|.|:|..||.|::|||:||
  Fly   164 ASGSPAGDGTKASSSCGSDVSGGHHNNGKPSDEDISDCESEPGIALKRKQRRCRTTFSASQLDEL 228

  Fly   411 EKAFKEAHYPDVSARELLSMKTGLAEDRIQVWYQNRRAKWRKTEKCWGHSTKMAEYGLYGAMVRH 475
            |:||:...|||:..||.|:.:|.|.|.|||||:.||||:.||...    |......|...|.|.|
  Fly   229 ERAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRARLRKQHT----SVSGGAPGGAAASVSH 289

  Fly   476 -----SLPLPETIIKSAKEDESVAPWLLGMHKKSLEAAELLKSDESDRETPTSDDTNTSYSAGST 535
                 |||   :::.|.   .|:||  |.|...||:.|.:.:.....    .....|.|.||.
  Fly   290 VAASSSLP---SVVSSV---PSMAP--LAMMPGSLDPATVYQQQYDF----YGSHANISVSAA-- 340

  Fly   536 HNSPISSFSISRLLFDAPPPAAGSAGGKGHHHHHHHHKGHHHAHV-------------------- 580
              :|::|.::|..:...||          |||..::...:..:::
  Fly   341 --APMASSNLSPGITTTPP----------HHHQFYNPSANTASYIMPGENGNTTPTGNIIVSSYE 393

  Fly   581 -------HAQAQAHAHMLLHHQQQQQQQQQQQQHHHHLHAAENSLQQQQVAGTGSGSGSGSGSG- 637
                   ..:.:.|..|    .:.:...:........|....||| ...|:|.|..|.||:.||
  Fly   394 TQLGSVYGTETETHQTM----PRNESPNESVSSAFGQLPPTPNSL-SAVVSGAGVTSSSGANSGA 453

  Fly   638 --------TGAGSTGPPA-----------------------------HHPYNQQQHL-------- 657
                    ..|||....|                             :.|.:.:..|
  Fly   454 DPSQSLANASAGSEELSAALKVESVDLIAASQSQLYGGWSSMQALRPNAPLSPEDSLNSTSSTSQ 518

  Fly   658 ------HHLQQLQQQQQQQQQQAQQQQQHHHHQHHHSVH-HMHHHNAAAG 700
                  |.:....|...|..........|.||.|.|:.| |.|.|...||
  Fly   519 ALDVTAHQMFHPYQHTPQYASYPAPGHAHSHHGHPHAPHPHAHPHPQYAG 568

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vsx1	NP_001284898.1	Homeobox	399..451	CDD:278475	29/51 (57%)
prd	NP_723721.1	PAX	27..154	CDD:238076
		Homeobox	217..269	CDD:278475	29/51 (57%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45450960
Domainoid	1	1.000	55	1.000	Domainoid score	I4097
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.840