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Protein Alignment Vsx1 and arxa
DIOPT Version :9
Sequence 1: | NP_001284898.1 |
Gene: | Vsx1 / 31470 |
FlyBaseID: | FBgn0263511 |
Length: | 837 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_571459.1 |
Gene: | arxa / 30657 |
ZFINID: | ZDB-GENE-990415-15 |
Length: | 453 |
Species: | Danio rerio |
Alignment Length: | 147 |
Identity: | 62/147 - (42%) |
Similarity: | 76/147 - (51%) |
Gaps: | 18/147 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 359 AAGGAGGNPNSLLAAHG-GDVLVG-------PGGTGPGGKKKNKRRHGRTIFTSSQLEELEKAFK 415
|.|....:|....:.|. |||..| .|.....|..|.|:|..||.|||.||||||:||:
Zfish 171 ACGDNSLSPKDEESLHNDGDVKDGEDSVCLSAGSDSEEGMLKRKQRRYRTTFTSYQLEELERAFQ 235
Fly 416 EAHYPDVSARELLSMKTGLAEDRIQVWYQNRRAKWRKTEKC--WGHSTKMAEYGLYGAM--VRHS 476
:.|||||..||.|:|:..|.|.|:|||:|||||||||.||. ..|.|.:...|...|. :.|.
Zfish 236 KTHYPDVFTREELAMRLDLTEARVQVWFQNRRAKWRKREKAGVQAHPTGLPFPGPLAAAHPLSHY 300
Fly 477 L------PLPETIIKSA 487
| |.|...::||
Zfish 301 LEGGPFPPHPHPALESA 317
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
1 |
0.960 |
- |
- |
|
|
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.870 |
|
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