Protein Alignment Vsx1 and phx1

DIOPT Version :10

• Sequence 1: NP_572232.2
• Gene: Vsx1 / 31470
• FlyBaseID: FBgn0263511
• Length: 837
• Species: Drosophila melanogaster
• Sequence 2: NP_593776.1
• Gene: phx1 / 2542405
• PomBaseID: SPAC32A11.03C
• Length: 942
• Species: Schizosaccharomyces pombe
• Alignment Length: 236
• Identity: 50/236 - (21%)
• Similarity: 81/236 - (34%)
• Gaps: 63/236 - (26%)

  Fly   365 GNPNSLLAAHGGDVLVGPGGTGPGGKKKNKRRHGRTIFTSSQLEELEKAFKEAHYPDVSARELLS 429
            |.|.|             ||:....|.|.:|      .|:.||..|.:.|.:...|..:.||.:.
pombe   155 GTPES-------------GGSTSAPKSKKQR------LTADQLAYLLREFSKDTNPPPAIREKIG 200

  Fly   430 MKTGLAEDRIQVWYQNRRAKWR-------------------------KTEKCWGH---STKMAEY 466
            .:..:.|..:.:|:||||||.:                         |..:.:.|   ||.....
pombe   201 RELNIPERSVTIWFQNRRAKSKLISRRQEEERQRILREQRELDSLNQKVSQAFAHEVLSTSPTSP 265

  Fly   467 GLYGAMVRHS-----LPLP-----ETIIKSAKEDESVAPWLLGMHKKSLEAAELLKSDESDRETP 521
            .:.|......     ||.|     ...:||.....|:.|.:.   :..:...:.|.|...:..:|
pombe   266 YVGGIAANRQYANTLLPKPTRKTGNFYMKSGPMQSSMEPCIA---ESDIPIRQSLSSTYYNSLSP 327

  Fly   522 TSDDTNT--SYSAGSTHNSPISSFSISRLLFDAPPPAAGSA 560
            .:...::  .|||.|....| ::.|:|...||...|.:..|
pombe   328 NAVPVSSQRKYSASSYSAIP-NAMSVSNQAFDVESPPSSYA 367

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vsx1	NP_572232.2	Homeodomain	395..452	CDD:459649	17/81 (21%)
phx1	NP_593776.1	COG5576	116..272	CDD:227863	29/135 (21%)