Protein Alignment Vsx1 and Gsc

DIOPT Version :10

• Sequence 1: NP_572232.2
• Gene: Vsx1 / 31470
• FlyBaseID: FBgn0263511
• Length: 837
• Species: Drosophila melanogaster
• Sequence 2: NP_034481.1
• Gene: Gsc / 14836
• MGIID: 95841
• Length: 256
• Species: Mus musculus
• Alignment Length: 310
• Identity: 74/310 - (23%)
• Similarity: 106/310 - (34%)
• Gaps: 97/310 - (31%)

  Fly   218 GGSGSGSGGGNPTSNGLGHLGSPTASNGGSGGGAGVGGSGGGSGTSGSNSSTSGNGGNGGSSGSR 282
            |.|..|:|||  ||:..|.......:.||:|..|.|     ||...|.||...      |....:
Mouse    40 GDSLYGAGGG--TSSDYGAFYPRPVAPGGAGLPAAV-----GSSRLGYNSYFY------GQLHVQ 91

  Fly   283 SSPAGPHHSAA---LAAHQHAAAAAAAAHHHAAAAAAAHHAHHAHAQAHAHAHAHVHAHAAHAAH 344
            ::|.||....|   |.|.|.:.......:....:...:...|......:....:.......:..|
Mouse    92 AAPVGPACCGAVPPLGAQQCSCVPTPPGYEGPGSVLVSPVPHQMLPYMNVGTLSRTELQLLNQLH 156

  Fly   345 AAHAHAHHAEAFLGAAGGAGGNPNSLLAAHGGDVLVGPGGTGPGGKKKNKRRHGRTIFTSSQLEE 409
            .                                              :.|||| |||||..|||.
Mouse   157 C----------------------------------------------RRKRRH-RTIFTDEQLEA 174

  Fly   410 LEKAFKEAHYPDVSARELLSMKTGLAEDRIQVWYQNRRAKWRKTEKCWGHSTKMAEYGLYGAMVR 474
            ||..|:|..||||..||.|:.|..|.|::::||::|||||||:.::
Mouse   175 LENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRRQKR------------------- 220

  Fly   475 HSLPLPETIIKSAKEDESVAPWLLGMHKKSLEAAELLKSDESDRETPTSD 524
                      .|::|.|:...|     .|:...|...|.:|..:....||
Mouse   221 ----------SSSEESENAEKW-----NKTSSKASPEKREEEGKSDLDSD 255

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vsx1	NP_572232.2	Homeodomain	395..452	CDD:459649	33/56 (59%)
Gsc	NP_034481.1	Homeodomain	161..217	CDD:459649	33/56 (59%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	213..256		14/77 (18%)