DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vsx2 and PHO2

DIOPT Version :10

Sequence 1:NP_001284897.1 Gene:Vsx2 / 31469 FlyBaseID:FBgn0263512 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_010177.1 Gene:PHO2 / 851452 SGDID:S000002264 Length:559 Species:Saccharomyces cerevisiae


Alignment Length:262 Identity:56/262 - (21%)
Similarity:84/262 - (32%) Gaps:94/262 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 FNAHAAVAAAFMPHQLAAAVHHHHQHQHQHHPHHHPHHPHGAVGGPPPPPPMQHHHPHHPHHPLL 181
            ||.|.|....::.|.      ...|.|.||...|:...       .|.|.|:|..:..|.|..  
Yeast    11 FNTHFATDLDYLQHD------QQQQQQQQHDQQHNQQQ-------QPQPQPIQTQNLEHDHDQ-- 60

  Fly   182 HAQGFPQLKSFAAGAGTCLPGSLAPKDFGMESLNGFGVGPNSKKKKKKRRHSRTIFTSYQLEKLE 246
            |.                       .|....| |....||...|:.:.:..:        |:.|:
Yeast    61 HT-----------------------NDMSASS-NASDSGPQRPKRTRAKGEA--------LDVLK 93

  Fly   247 EAFKEAHYPDVYAREMLSLKTELPEDRIQVWFQNRRAKWRKTEKVWGGSTIMAEYGLYGAMVRHS 311
            ..|:....|.:..|:.:|....:||..:::||||||||.||.:.   ||.               
Yeast    94 RKFEINPTPSLVERKKISDLIGMPEKNVRIWFQNRRAKLRKKQH---GSN--------------- 140

  Fly   312 LPLPDTILKSAKDNDAVAPWLLGMEQKCMHRKSIEAQSALKDDSGVSDHE---DSAGSKSAHSED 373
               .||| .|::..|....:                      |.|.:|:.   .::.|...|.||
Yeast   141 ---KDTI-PSSQSRDIANDY----------------------DRGSTDNNLVTTTSTSSIFHDED 179

  Fly   374 LS 375
            |:
Yeast   180 LT 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vsx2NP_001284897.1 Homeodomain 230..287 CDD:459649 16/56 (29%)
OAR 556..572 CDD:461067
PHO2NP_010177.1 COG5576 53..183 CDD:227863 42/207 (20%)
Blue background indicates that the domain is not in the aligned region.

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