DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vsx2 and ALX1

DIOPT Version :9

Sequence 1:NP_001284897.1 Gene:Vsx2 / 31469 FlyBaseID:FBgn0263512 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_008913.2 Gene:ALX1 / 8092 HGNCID:1494 Length:326 Species:Homo sapiens


Alignment Length:435 Identity:99/435 - (22%)
Similarity:136/435 - (31%) Gaps:191/435 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   164 PPPPMQHH---------HPHHPHHPLLHAQGFPQLKSFAAGAGTCLPGSLAPKDFGME---SLNG 216
            |.|..:||         .....::.:...:|.|...........|....::|.. ||:   .|:.
Human    55 PLPRAEHHVRLERTSPCQDSSVNYGITKVEGQPLHTELNRAMDNCNSLRMSPVK-GMQEKGELDE 118

  Fly   217 FGVGPNSKKKKKKRRHSRTIFTSYQLEKLEEAFKEAHYPDVYAREMLSLKTELPEDRIQVWFQNR 281
            .|...:|.....|:|..||.|||.|||:||:.|::.||||||.||.|:|:|||.|.|:|||||||
Human   119 LGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQVWFQNR 183

  Fly   282 RAKWRKTEKVWGGSTIMAEYGLYGAMVRHSLPLPDTILKSAKDNDAVAPWLLGMEQKCMHRKSIE 346
            ||||||.|:             ||.:                                       
Human   184 RAKWRKRER-------------YGQI--------------------------------------- 196

  Fly   347 AQSALKDDSGVSDHEDSAGSKSAHSEDLSRSRCHALSSSTESLNVVSPAPSSCPTSASTSAPPTS 411
                           ..|.|..|.:.|:|                |.|        .:.|.|...
Human   197 ---------------QQAKSHFAATYDIS----------------VLP--------RTDSYPQIQ 222

  Fly   412 TSGYAGAASSAATTPTGASTTNSSSSPHIELGSPSPQQQQHLQLQQQQQQQASLYLGAGAVVTGC 476
            .:.:||.||                                                .|:|||.|
Human   223 NNLWAGNAS------------------------------------------------GGSVVTSC 239

  Fly   477 ----------APPSYHPLLDAANAAGAGAAASSKDF-HMIMNTAVA-AAAAAAQQQHQQQQQQQQ 529
                      .|.|:.|..|::.   .|.:.....| |:.:|.... :....|...|        
Human   240 MLPRDTSSCMTPYSHSPRTDSSY---TGFSNHQNQFSHVPLNNFFTDSLLTGATNGH-------- 293

  Fly   530 QATATAPGLHAHNLAAALMEHDPDAFRNNSIACLRAKAQEHQARL 574
             |..|.|....               |::|||.||.||:||.|.:
Human   294 -AFETKPEFER---------------RSSSIAVLRMKAKEHTANI 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vsx2NP_001284897.1 Homeobox 233..286 CDD:278475 36/52 (69%)
OAR 556..570 CDD:281777 8/13 (62%)
ALX1NP_008913.2 Homeobox 135..189 CDD:365835 37/53 (70%)
Transactivation domain. /evidence=ECO:0000250|UniProtKB:Q63087 192..326 44/297 (15%)
OAR 302..320 CDD:367680 10/32 (31%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 306..319 8/12 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D454642at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
32.880

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