Sequence 1: | NP_001284897.1 | Gene: | Vsx2 / 31469 | FlyBaseID: | FBgn0263512 | Length: | 645 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001116445.1 | Gene: | lhx4 / 571943 | ZFINID: | ZDB-GENE-060728-1 | Length: | 391 | Species: | Danio rerio |
Alignment Length: | 242 | Identity: | 66/242 - (27%) |
---|---|---|---|
Similarity: | 93/242 - (38%) | Gaps: | 60/242 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 231 RHSRTIFTSYQLEKLEEAFKEAHYPDVYAREMLSLKTELPEDRIQVWFQNRRAKWRKTEKVWGGS 295
Fly 296 TIMAEYGLYGAMVRHSLPLPDTILKSAKDNDAVAPWLLGMEQKCMHRKSIEAQSALKDDSGVSDH 360
Fly 361 E-----DSAGSKSAHSEDL-----SRSRCHALSSS---------TESLNVVSP-----APSSCPT 401
Fly 402 SASTSAPPTSTSGYA--GAASSAATTPTGASTTNSSSSPHIELGSPS 446 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Vsx2 | NP_001284897.1 | Homeobox | 233..286 | CDD:278475 | 26/52 (50%) |
OAR | 556..570 | CDD:281777 | |||
lhx4 | NP_001116445.1 | LIM1_Lhx4 | 33..84 | CDD:188852 | |
LIM2_Lhx3_Lhx4 | 92..147 | CDD:188762 | |||
Homeobox | 163..216 | CDD:278475 | 26/52 (50%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1174754at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |