Protein Alignment Vsx2 and sv

DIOPT Version :9

• Sequence 1: NP_001284897.1
• Gene: Vsx2 / 31469
• FlyBaseID: FBgn0263512
• Length: 645
• Species: Drosophila melanogaster
• Sequence 2: NP_524633.3
• Gene: sv / 43825
• FlyBaseID: FBgn0005561
• Length: 844
• Species: Drosophila melanogaster
• Alignment Length: 738
• Identity: 125/738 - (16%)
• Similarity: 220/738 - (29%)
• Gaps: 305/738 - (41%)

  Fly   132 LAAAVHHHH---QHQHQH---HPH------------------HHPHHPHGAVGGPPPPPPMQHHH 172
            :..:.||.|   .|:.||   |||                  |...|            ..|||.
  Fly     6 IQTSTHHIHGLGTHELQHRILHPHILHSTQEETLNTSTGQLEHDSQH------------LQQHHL 58

  Fly   173 PHHPHH---PLLHAQGFPQLKSFAAGAGTCLPGSLAPKDFGMESLNGFGVGPNSKKKKKKRRHSR 234
            .||...   |.||     .|::...|.......:......|.:.|:|..:..:|:.:.|.:.:..
  Fly    59 THHQQQDVSPTLH-----NLQNTRTGDSLSTTINTNQNQHGHQHLSGSNMYTSSQMEDKSKANKY 118

  Fly   235 TIFTSYQLEKLEEA----------------------------FKEAH------------------ 253
            ..::|..|..:.:|                            .:::|
  Fly   119 DEYSSRTLSNISDANTTPSANNFITQSQGIEWITAMNDIQNGAEDSHSSQGSISGDGHGGVNQLG 183

  Fly   254 --------YPDVYAREMLSLKTELPEDRIQVWFQNRRAKWRKTEKVWGG--STIMAEY------- 301
                    .|||..:.::    ||..:.::....:|:.      :|..|  |.|::.|
  Fly   184 GVFVNGRPLPDVVRQRIV----ELAHNGVRPCDISRQL------RVSHGCVSKILSRYYETGSFK 238

  Fly   302 -GLYGAMVRH--SLPLPDTILKSAKDNDAVAPWLLGMEQKCMHRKSIEAQSALKDDS--GVSDHE 361
             |:.|.....  :.|:.|.|....::|..:..|.:        |..:.|::....|:  .||...
  Fly   239 AGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEI--------RDRLLAEAICSQDNVPSVSSIN 295

  Fly   362 DSAGSKSAH-SEDLSRSRCHALSSSTESLNVVSPAPSSCPTSASTSAPPTSTS-------GYAGA 418
            ....:|:|. ::.:...:.|.:|.|....::.:.:..|...:.....||||.|       ..:.:
  Fly   296 RIVRNKAAEKAKHVHHHQQHHVSQSLGGGHIATESVDSSTGTIGEPQPPTSNSSANSVNTNVSAS 360

  Fly   419 ASSAATTPT----------GASTTNSSSSPHIE---------------LG--------------- 443
            ||..|:.||          |....||:.:.||.               ||
  Fly   361 ASVHASIPTSGTDSVQVSVGHINANSNETTHINSTAEQRTTGYSINGILGIQHGHHSHNNNNNSS 425

  Fly   444 ------SPSPQQQQHLQLQQQ-------------QQQQASLY----------------------- 466
                  :.|..:::.::...:             ::|:.|.|
  Fly   426 VNNNNNTESSCKRKRIEAHDENHDTNIHSDNDDGKRQRMSTYSGDQLYTNIWSGKWCIKDDHKLL 490

  Fly   467 --LGAGAVVTGCAPPSYHPLLDAANA------AGAGAAASSKDFHMIMNTAVAAAAAAAQQQHQQ 523
              ||.....||..|.:|:   :|:|.      :|:||.||..|..|:.::....:
  Fly   491 AELGNLTASTGNCPATYY---EASNGFSTTPISGSGATASGNDTSMLYDSITTIS---------- 542

  Fly   524 QQQQQQQATATAP-------------GLHAHNLAAALMEHD--PD-----AFRNNSIA------C 562
            |.|......|..|             .:|...|:|..::..  |.     ||..|..:      |
  Fly   543 QTQSSIYTPAIGPSIGTGSLTPLVPISMHEMKLSANSIQEQTVPPFYTALAFDGNYTSMTSLENC 607

  Fly   563 LRAKAQEHQARLLNNGGLFLQVRRFAQGQAQIQDPSDMLKLSEEHNNNSPIPI-----PPAHSTV 622
            .....|||                              :.:.|..::|:..||     |....|.
  Fly   608 SSLVGQEH------------------------------IVMPESSDSNTLCPISTRIVPDITETN 642

  Fly   623 NTQVNVKMELT-ANGGSMKNYEE 644
            :|:  ||..|| ::|.|..|.:|
  Fly   643 STR--VKEPLTNSDGCSEDNNKE 663

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vsx2	NP_001284897.1	Homeobox	233..286	CDD:278475	10/106 (9%)
		OAR	556..570	CDD:281777	3/19 (16%)
sv	NP_524633.3	PAX	175..299	CDD:128645	23/141 (16%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45450975
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840