Protein Alignment Vsx2 and gsb-n

DIOPT Version :9

• Sequence 1: NP_001284897.1
• Gene: Vsx2 / 31469
• FlyBaseID: FBgn0263512
• Length: 645
• Species: Drosophila melanogaster
• Sequence 2: NP_523862.1
• Gene: gsb-n / 38004
• FlyBaseID: FBgn0001147
• Length: 449
• Species: Drosophila melanogaster
• Alignment Length: 308
• Identity: 90/308 - (29%)
• Similarity: 124/308 - (40%)
• Gaps: 71/308 - (23%)

  Fly   207 KDFGMESLNGFGVGPNSK----------KKKKKRRHSRTIFTSYQLEKLEEAFKEAHYPDVYARE 261
            ||:   ::||...|.:|.          ..|:|:|.|||.||:.|||.||.||....|||||.||
  Fly   152 KDY---TINGILGGRDSDISDTESEPGIPLKRKQRRSRTTFTAEQLEALERAFSRTQYPDVYTRE 213

  Fly   262 MLSLKTELPEDRIQVWFQNRRAKWRK---------TEKVWGGSTIMAEYGLYGA----------- 306
            .|:..|.|.|.||||||.||||:.||         :....|.|.:....||.||
  Fly   214 ELAQTTALTEARIQVWFSNRRARLRKHSGGSNSGLSPMNSGSSNVGVGVGLSGATAPLGYGPLGV 278

  Fly   307 --MVRHSLPLPDTILKSAKDNDAV-----APWLLGMEQKCMHRKSIEAQSALKDDS--GVSDHED 362
              |..:| |.|.|....|..||.|     ||        ..|..:..|.:|....:  |..|...
  Fly   279 GSMAGYS-PAPGTTATGAGMNDGVHHAAHAP--------SSHHSAATAAAAAHHHTQMGGYDLVQ 334

  Fly   363 SA---------------GSKSAHSEDLSRSRCHALSSST-ESLNVVSPAPSSCPTSASTSAPPT- 410
            ||               ||::.:.:|.|:......|..| :|::.:||:.......:...||..
  Fly   335 SAAQHGFPGGFAQPGHFGSQNYYHQDYSKLTIDDFSKLTADSVSKISPSLHLSDNYSKLEAPSNW 399

  Fly   411 STSGYAGAASSAATTPTGASTTNSSSSPHIELGSPSPQQQQHLQLQQQ 458
            |.:.|..||:..|..........::::.|   |:|:......|..|.|
  Fly   400 SQAAYHAAANYNAHVAQHQLNDYAAAAAH---GNPASAYSHPLPTQGQ 444

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vsx2	NP_001284897.1	Homeobox	233..286	CDD:278475	33/52 (63%)
		OAR	556..570	CDD:281777
gsb-n	NP_523862.1	PAX	20..141	CDD:278709
		Homeobox	185..238	CDD:278475	33/52 (63%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45450956
Domainoid	1	1.000	55	1.000	Domainoid score	I4097
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.840