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Protein Alignment Vsx2 and PHDP
DIOPT Version :9
Sequence 1: | NP_001284897.1 |
Gene: | Vsx2 / 31469 |
FlyBaseID: | FBgn0263512 |
Length: | 645 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_523834.1 |
Gene: | PHDP / 37788 |
FlyBaseID: | FBgn0025334 |
Length: | 220 |
Species: | Drosophila melanogaster |
Alignment Length: | 83 |
Identity: | 43/83 - (51%) |
Similarity: | 55/83 - (66%) |
Gaps: | 3/83 - (3%) |
- Green bases have known domain annotations that are detailed below.
Fly 208 DFGMESLNGFGVGPNSKKKKKKRRHSRTIFTSYQLEKLEEAFKEAHYPDVYAREMLSLKTELPED 272
||.::|....|: |...|.|:|..||.|||.||.:||:.|.|.||||:|.||.::.|..|.|.
Fly 93 DFHLKSYGDDGL---SLTDKSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEA 154
Fly 273 RIQVWFQNRRAKWRKTEK 290
|:||||||||||:||.|:
Fly 155 RVQVWFQNRRAKFRKQER 172
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Vsx2 | NP_001284897.1 |
Homeobox |
233..286 |
CDD:278475 |
32/52 (62%) |
OAR |
556..570 |
CDD:281777 |
|
PHDP | NP_523834.1 |
Homeobox |
116..168 |
CDD:278475 |
32/51 (63%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
55 |
1.000 |
Domainoid score |
I4097 |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG0494 |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.810 |
|
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