DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vsx2 and VSX2

DIOPT Version :10

Sequence 1:NP_001284897.1 Gene:Vsx2 / 31469 FlyBaseID:FBgn0263512 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_878314.1 Gene:VSX2 / 338917 HGNCID:1975 Length:361 Species:Homo sapiens


Alignment Length:314 Identity:136/314 - (43%)
Similarity:161/314 - (51%) Gaps:83/314 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 HPHGAVGGPPPPPPMQHHHPHHPHHPLLHAQGFPQLKSFAAGAGTCLPGSLA------------- 205
            ||..|:.|..            |.| ||.|:.... .:...|.|...||.|.             
Human    48 HPRAALDGLA------------PGH-LLAARSVLS-PAGVGGMGLLGPGGLPGFYTQPTFLEVLS 98

  Fly   206 -PKDFGMESLNGFGVGP--------------------------NSKKKKKKRRHSRTIFTSYQLE 243
             |:...::.| |...||                          |..||:||||| ||||||||||
Human    99 DPQSVHLQPL-GRASGPLDTSQTASSDSEDVSSSDRKMSKSALNQTKKRKKRRH-RTIFTSYQLE 161

  Fly   244 KLEEAFKEAHYPDVYAREMLSLKTELPEDRIQVWFQNRRAKWRKTEKVWGGSTIMAEYGLYGAMV 308
            :||:||.|||||||||||||::||||||||||||||||||||||.||.||.|::|||||||||||
Human   162 ELEKAFNEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAKWRKREKCWGRSSVMAEYGLYGAMV 226

  Fly   309 RHSLPLPDTILKSAKDN--DAVAPWLLGMEQKCMHRKSIEA------------QSALKDDSGVSD 359
            |||:|||::|||||||.  |:.||||||     ||:||:||            |:..|.|....|
Human   227 RHSIPLPESILKSAKDGIMDSCAPWLLG-----MHKKSLEAAAESGRKPEGERQALPKLDKMEQD 286

  Fly   360 HEDSAGSKSAHSEDLSRS-----RCHALSSSTESLNVVSPAPSSCPTSASTSAP 408
            ........:...|:|..:     |..|...||:.|..|| .|.|  .:.||..|
Human   287 ERGPDAQAAISQEELRENSIAVLRAKAQEHSTKVLGTVS-GPDS--LARSTEKP 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vsx2NP_001284897.1 Homeodomain 230..287 CDD:459649 50/56 (89%)
OAR 556..572 CDD:461067
VSX2NP_878314.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 104..151 10/47 (21%)
Homeodomain 153..205 CDD:459649 46/51 (90%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 262..300 5/37 (14%)
OAR 300..318 CDD:461067 3/17 (18%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 304..317 2/12 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 313..361 11/28 (39%)
Blue background indicates that the domain is not in the aligned region.

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