Protein Alignment Vsx2 and al

DIOPT Version :9

• Sequence 1: NP_001284897.1
• Gene: Vsx2 / 31469
• FlyBaseID: FBgn0263512
• Length: 645
• Species: Drosophila melanogaster
• Sequence 2: NP_722629.1
• Gene: al / 33208
• FlyBaseID: FBgn0000061
• Length: 408
• Species: Drosophila melanogaster
• Alignment Length: 458
• Identity: 132/458 - (28%)
• Similarity: 175/458 - (38%)
• Gaps: 141/458 - (30%)

  Fly   175 HPHHPLL--HAQGFPQLKSFAAGAGTCLPGSLAPKDFGMESLNGFGVGPNSK------------- 224
            ||...:|  .|.|     |.||.||..|..|::.........:|...|.||.
  Fly    20 HPDAVVLVDRAPG-----SSAASAGAALTVSMSVSGGAPSGASGASGGTNSPVSDGNSDCEADEY 79

  Fly   225 KKKKKRRHSRTIFTSYQLEKLEEAFKEAHYPDVYAREMLSLKTELPEDRIQVWFQNRRAKWRKTE 289
            ..|:|:|..||.|||:|||:||:||...|||||:.||.|::|..|.|.|||||||||||||||.|
  Fly    80 APKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWRKQE 144

  Fly   290 KVW-----------GGSTIMAEYGLYGAMVRHSLPLPDTILKSAKDNDAVAPWLLGMEQKCMHRK 343
            ||.           ||:..|.      .:|..:|| |:....            ||.:.    ||
  Fly   145 KVGPQSHPYNPYLPGGAATMQ------TVVGAALP-PNPFTH------------LGFQL----RK 186

  Fly   344 SIEAQSALKDDSGVSDHEDSAGS-KSAHSEDLSRSRCHAL----------SSSTESL--NVVS-- 393
            ..:||.|....:....|..:|.. .|.:.....|:..|.|          |||.:||  |:.:
  Fly   187 PFDAQHAANLAAFRYPHLSAAPMIPSGYFNQFQRAPPHMLPHGMAGMYSPSSSFQSLLANMTAVP 251

  Fly   394 --------PA-----PSSCPTSASTSAPPTSTSGYAGAASSAATTPTGASTTNSSSSPHIELG-S 444
                    ||     |.....:...::||||.:  :|.||.....|| |......:.|.:.:| .
  Fly   252 RGTPLGKPPALLVGSPDLHSPNHMLASPPTSPA--SGHASQHQQHPT-AHPPPPQAPPQMPVGVQ 313

  Fly   445 PSPQQQQHLQLQQQQQQQASLYLGAGAVVTGCAPPSYHPLLDAANAAGAGAAASSKDFHMIMNTA 509
            |:....|||......||.:||           :|....|:
  Fly   314 PAQLSPQHLVGIALTQQASSL-----------SPTQTSPV------------------------- 342

  Fly   510 VAAAAAAAQQQHQQQQQ---QQQQATATAPGLHAHNLAAALMEHDPDAFRNNSIACLRAKAQEHQ 571
                  |....|..|:|   ...||....|       .||.   .|:..|.:|||.||.||:||:
  Fly   343 ------ALTLSHSPQRQLPPPSHQAPPPPP-------RAAT---PPEDRRTSSIAALRLKAREHE 391

  Fly   572 ARL 574
            .:|
  Fly   392 LKL 394

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vsx2	NP_001284897.1	Homeobox	233..286	CDD:278475	35/52 (67%)
		OAR	556..570	CDD:281777	8/13 (62%)
al	NP_722629.1	Homeobox	89..141	CDD:278475	35/51 (69%)
		OAR	374..391	CDD:281777	9/16 (56%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45450962
Domainoid	1	1.000	55	1.000	Domainoid score	I4097
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D454642at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	4	3.850