Protein Alignment Vsx2 and Alx4

DIOPT Version :9

• Sequence 1: NP_001284897.1
• Gene: Vsx2 / 31469
• FlyBaseID: FBgn0263512
• Length: 645
• Species: Drosophila melanogaster
• Sequence 2: NP_001100023.1
• Gene: Alx4 / 296511
• RGDID: 1310201
• Length: 399
• Species: Rattus norvegicus
• Alignment Length: 456
• Identity: 111/456 - (24%)
• Similarity: 153/456 - (33%)
• Gaps: 202/456 - (44%)

  Fly   162 PPPPPPMQHHHPHHPHHPLLH-------AQGFPQLKSFAAGAGTCLPGSLAPKD----------- 208
            |||.||..      |.|..|.       ..|..:|:..:.|....|......|:
  Rat    99 PPPAPPAP------PAHLYLQRGACKTPPDGSLKLQEGSGGHNAALQVPCYAKESNLGEPELPPD 157

  Fly   209 ---FGME----SLNGFGV-GP---------------NSKKKKKKRRHSRTIFTSYQLEKLEEAFK 250
               .||:    |:...|. ||               :|:..|.|:|.:||.|||||||:||:.|:
  Rat   158 SEPVGMDNSYLSVKETGAKGPQDRAGAEIPSPLEKTDSESSKGKKRRNRTTFTSYQLEELEKVFQ 222

  Fly   251 EAHYPDVYAREMLSLKTELPEDRIQVWFQNRRAKWRKTEKVWGGSTIMAEYGLYGAMVRHSLPLP 315
            :.|||||||||.|:::|:|.|.|:|||||||||||||.|:......:...:.     ..:.|||
  Rat   223 KTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRKRERFGQMQQVRTHFS-----TAYELPL- 281

  Fly   316 DTILKSAKDNDAVAPWLLGMEQKCMHRKSIEAQSALKDDSGVSDHEDSAGSKSAHSEDLSRSRCH 380
                                                                      |:|:..:
  Rat   282 ----------------------------------------------------------LTRAENY 288

  Fly   381 ALSSSTESLNVVSPAPSSCPTSASTSAPPTSTSGYAGAAS--SAATTPTGASTTNSSSSPHIELG 443
            |        .:.:|                |..|..||||  .|...|.
  Rat   289 A--------QIQNP----------------SWIGNNGAASPVPACVVPC---------------- 313

  Fly   444 SPSPQQQQHLQLQQQQQQQASLYLGAGAVVTGCAPPSYHPLLDAANAAGAGAAASSKDFHMIMNT 508
            .|.|                           .|..|..||       .|:||::.| ||     .
  Rat   314 DPVP---------------------------ACMSPHAHP-------PGSGASSVS-DF-----L 338

  Fly   509 AVAAAAAAAQQQHQQQQQQQQQATATAPGLHAHNLAAALMEHDPDAFRNNSIACLRAKAQEHQAR 573
            :|:.|.:...|.|   ......|...:|||:.:.     |..:||. :.:|||.||.||:||.|.
  Rat   339 SVSGAGSHVGQTH---MGSLFGAAGISPGLNGYE-----MNGEPDR-KTSSIAALRMKAKEHSAA 394

  Fly   574 L 574
            :
  Rat   395 I 395

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vsx2	NP_001284897.1	Homeobox	233..286	CDD:278475	36/52 (69%)
		OAR	556..570	CDD:281777	7/13 (54%)
Alx4	NP_001100023.1	Homeobox	206..258	CDD:278475	36/51 (71%)
		OAR	375..392	CDD:281777	9/17 (53%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D454642at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	4	3.880