DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vsx2 and ALX3

DIOPT Version :10

Sequence 1:NP_001284897.1 Gene:Vsx2 / 31469 FlyBaseID:FBgn0263512 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_006483.2 Gene:ALX3 / 257 HGNCID:449 Length:343 Species:Homo sapiens


Alignment Length:323 Identity:90/323 - (27%)
Similarity:122/323 - (37%) Gaps:107/323 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 PHHHPHHPHG-------AVG----------GPP--------PPPPMQHHH----PHHPHHPLLHA 183
            ||.||..|.|       |.|          .||        |.|.:...|    |.........|
Human    36 PHLHPAPPRGPRLTRFPACGPLEPYLPEPAKPPAKYLQDLGPGPALNGGHFYEGPAEAEEKTSKA 100

  Fly   184 QGFPQL------------KSFAAGAGTCLPGSLAPKDFGMESLNGFGVGPNS---KKKKKKRRHS 233
            ..||||            .:.....|.||.....|...|:         |:|   .|.|.|:|.:
Human   101 ASFPQLPLDCRGGPRDGPSNLQGSPGPCLASLHLPLSPGL---------PDSMELAKNKSKKRRN 156

  Fly   234 RTIFTSYQLEKLEEAFKEAHYPDVYAREMLSLKTELPEDRIQVWFQNRRAKWRKTEKVWGGSTIM 298
            ||.|:::|||:||:.|::.|||||||||.|:|:|:|.|.|:|||||||||||||.|:        
Human   157 RTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWRKRER-------- 213

  Fly   299 AEYGLYGAMVRHSLPLPDTILKSAKDNDAVAPWLLGMEQKCMHRKSIEAQSALKDDSGVSDHEDS 363
                 ||.:.....|.      :|..:.:|.|             ..::...|::....|....|
Human   214 -----YGKIQEGRNPF------TAAYDISVLP-------------RTDSHPQLQNSLWASPGSGS 254

  Fly   364 AGSKSAHSEDLSRSRCHALSSSTESLNVVSPAPSSCPTSASTSAPPTSTSGYAGAASSAATTP 426
            .|..           |           :|||.....|..:..|.|..|.:|:.|..:.:|..|
Human   255 PGGP-----------C-----------LVSPEGIPSPCMSPYSHPHGSVAGFMGVPAPSAAHP 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vsx2NP_001284897.1 Homeodomain 230..287 CDD:459649 36/56 (64%)
OAR 556..572 CDD:461067
ALX3NP_006483.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..104 15/67 (22%)
PRK12323 <13..131 CDD:481241 22/94 (23%)
Homeodomain 154..210 CDD:459649 36/55 (65%)
Blue background indicates that the domain is not in the aligned region.

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