DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vsx2 and OTP

DIOPT Version :10

Sequence 1:NP_001284897.1 Gene:Vsx2 / 31469 FlyBaseID:FBgn0263512 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_115485.1 Gene:OTP / 23440 HGNCID:8518 Length:325 Species:Homo sapiens


Alignment Length:376 Identity:88/376 - (23%)
Similarity:123/376 - (32%) Gaps:133/376 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   201 PGSLAPKDFGMESLNGFGVGPNSKK------KKKKRRHSRTIFTSYQLEKLEEAFKEAHYPDVYA 259
            |.|||......:...|...|||..:      ::|::|| ||.||..||.:||.:|.:.||||::.
Human    70 PASLAVSAKDPDKQPGPQGGPNPSQAGQQQGQQKQKRH-RTRFTPAQLNELERSFAKTHYPDIFM 133

  Fly   260 REMLSLKTELPEDRIQVWFQNRRAKWRKTEKVWGGSTIMAEYGLYGAMVRHSLPLPDTILKSAKD 324
            ||.|:|:..|.|.|:|||||||||||:|.:|                 ..:....|.|:|.:   
Human   134 REELALRIGLTESRVQVWFQNRRAKWKKRKK-----------------TTNVFRAPGTLLPT--- 178

  Fly   325 NDAVAPWLLGMEQKCMHRKSIEAQSALKDDSGVSDHEDSAGSKSAHSEDLSRSRCHALSSSTESL 389
                                          .|:.....:|.:.:|...|   |.|...::.|...
Human   179 ------------------------------PGLPQFPSAAAAAAAAMGD---SLCSFHANDTRWA 210

  Fly   390 NVVSPAPSSCPTSASTSAPPTSTSGYAGAASSAATTPTGASTTNSSSSPHIELGSPSPQQQQHLQ 454
            ....|..|..|...:...........:..:.:|...|.....:||.:      ||.....|.|  
Human   211 AAAMPGVSQLPLPPALGRQQAMAQSLSQCSLAAGPPPNSMGLSNSLA------GSNGAGLQSH-- 267

  Fly   455 LQQQQQQQASLYLGAGAVVTGCAPPSYHPLLDAANAAGAGAAASSKDFHMIMNTAVAAAAAAAQQ 519
                      ||..|   ..|..|.|   |...:|.:|:....||.|                  
Human   268 ----------LYQPA---FPGMVPAS---LPGPSNVSGSPQLCSSPD------------------ 298

  Fly   520 QHQQQQQQQQQATATAPGLHAHNLAAALMEHDPDAFRNNSIACLRAKAQEH 570
                                           ..|.:|..|||.||.||.||
Human   299 -------------------------------SSDVWRGTSIASLRRKALEH 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vsx2NP_001284897.1 Homeodomain 230..287 CDD:459649 33/56 (59%)
OAR 556..572 CDD:461067 10/15 (67%)
OTPNP_115485.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 32..112 13/42 (31%)
Homeodomain 106..156 CDD:459649 28/50 (56%)
OAR 303..320 CDD:461067 10/16 (63%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 306..319 9/13 (69%)

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