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Protein Alignment Vsx2 and ceh-10
DIOPT Version :9
| Sequence 1: | NP_001284897.1 |
Gene: | Vsx2 / 31469 |
FlyBaseID: | FBgn0263512 |
Length: | 645 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_498251.1 |
Gene: | ceh-10 / 175811 |
WormBaseID: | WBGene00000435 |
Length: | 344 |
Species: | Caenorhabditis elegans |
| Alignment Length: | 157 |
Identity: | 98/157 - (62%) |
| Similarity: | 117/157 - (74%) |
Gaps: | 12/157 - (7%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 213 SLNGFGVGPNSKKKKKKRRHSRTIFTSYQLEKLEEAFKEAHYPDVYAREMLSLKTELPEDRIQVW 277
|..|...|...|..|:|:|..|||||.||:::||:||:::||||:||||:|:.||||.|||||||
Worm 119 SSGGGSSGGGGKASKRKKRRHRTIFTQYQIDELEKAFQDSHYPDIYAREVLAGKTELQEDRIQVW 183
Fly 278 FQNRRAKWRKTEKVWGGSTIMAEYGLYGAMVRHSLPLPDTILKSAKDND---AVAPWLLGMEQKC 339
|||||||||||||.||.|||||||||||||||||||||:||.|||:..| :.||||||
Worm 184 FQNRRAKWRKTEKTWGKSTIMAEYGLYGAMVRHSLPLPETITKSAEAADPQQSAAPWLLG----- 243
Fly 340 MHRKSIEA----QSALKDDSGVSDHED 362
||:||:|| :|..|.|...||.:|
Worm 244 MHKKSMEAAAHLESVEKCDMSDSDDDD 270
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| Vsx2 | NP_001284897.1 |
Homeobox |
233..286 |
CDD:278475 |
38/52 (73%) |
| OAR |
556..570 |
CDD:281777 |
|
| ceh-10 | NP_498251.1 |
Homeobox |
139..192 |
CDD:278475 |
38/52 (73%) |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
| Tool |
Simple Score |
Weighted Score |
Original Tool Information |
| BLAST Result |
Score |
Score Type |
Cluster ID |
| Compara |
1 |
0.930 |
- |
- |
|
C160160737 |
| Domainoid |
1 |
1.000 |
97 |
1.000 |
Domainoid score |
I4546 |
| eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG0494 |
| Hieranoid |
0 | 0.000 |
Not matched by this tool. |
| Homologene |
0 | 0.000 |
Not matched by this tool. |
| Inparanoid |
0 | 0.000 |
Not matched by this tool. |
| Isobase |
0 | 0.000 |
Not matched by this tool. |
| OMA |
0 | 0.000 |
Not matched by this tool. |
| OrthoDB |
0 | 0.000 |
Not matched by this tool. |
| OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0002963 |
| OrthoInspector |
1 |
1.000 |
- |
- |
|
otm14737 |
| orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_109254 |
| Panther |
0 | 0.000 |
Not matched by this tool. |
| Phylome |
1 |
0.910 |
- |
- |
|
|
| RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R2566 |
| SonicParanoid |
1 |
1.000 |
- |
- |
|
X5856 |
| SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
| TreeFam |
1 |
0.960 |
- |
- |
|
|
|
10 | 9.630 |
|
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