DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vsx2 and Ptx1

DIOPT Version :10

Sequence 1:NP_001284897.1 Gene:Vsx2 / 31469 FlyBaseID:FBgn0263512 Length:645 Species:Drosophila melanogaster
Sequence 2:XP_061519626.1 Gene:Ptx1 / 1272074 VectorBaseID:AGAMI1_014324 Length:493 Species:Anopheles gambiae


Alignment Length:472 Identity:119/472 - (25%)
Similarity:167/472 - (35%) Gaps:133/472 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 HHQPH-HHQYREHHQMTMAAASRMAYFNAHAAVAAAFMPHQLAAA----VHHHHQHQHQHHPHHH 151
            ||.|| ||..  |..:.....|      ..:|:.:...|..:.:.    :||.......||.|||
Mosquito    77 HHGPHTHHSL--HDGLVSGGVS------VSSAITSLMSPGGINSGGLGHLHHGAPDLSAHHHHHH 133

  Fly   152 PHHPHGAVGGPPPPPPMQHHHPHHPHHPLL--------------------------HAQ-GFPQL 189
            .||              ||||....|.||.                          ||| |||..
Mosquito   134 HHH--------------QHHHSSALHEPLEKLKLWAETGDFRENSHTGMTSVSSIDHAQMGFPAS 184

  Fly   190 K-------------------------------SFAAGAGTCLPGSLAPKDFGMESLNGFGVGPNS 223
            .                               |...|.|:..||:...:| |.:       |..:
Mosquito   185 SPRNRSSRDRKNDVSRCINEASVKTENLSSGMSHEDGTGSVAPGTTIQQD-GTD-------GTKN 241

  Fly   224 KKKKKKRRHSRTIFTSYQLEKLEEAFKEAHYPDVYAREMLSLKTELPEDRIQVWFQNRRAKWRKT 288
            .||.|::|..||.|||.||.:||:.|....|||:..||.:::.|.|.|.|::|||:||||||||.
Mosquito   242 DKKNKRQRRQRTHFTSQQLHELEQTFSRNRYPDMSTREEIAMWTNLTEARVRVWFKNRRAKWRKR 306

  Fly   289 EKVWGGSTIMAEY-GLYGAMVRHSLPLPDTILKS-AKDNDAVAPWLLGMEQKCMHRKSIEAQSAL 351
            |:....:...|:: ..:|..........||:..| ..:|.|..|..||               |.
Mosquito   307 ERNQMNAIAAADFKNGFGPQFVQPFADTDTLYSSYTYNNWAKVPSPLG---------------AK 356

  Fly   352 KDDSGVSDHEDSAGSKSAHSEDLSRSRCHALSSSTESLNVVSPAPSSCPTSASTSAPPTSTSGYA 416
            .....|:....|..|.:.|...::   |...|:|:.:..:.... :..|.|..|..  |.|||..
Mosquito   357 TFPWTVNPLGTSIVSTNHHQNSIN---CFNTSASSVAAGMAGTG-TMLPASMGTGL--TGTSGAT 415

  Fly   417 GAASSAA--TTPTGASTTNSSSSPHIELGSPSPQQQQHLQLQQQQQQQASLYLGAGAVVTGCAPP 479
            |.:.:..  |||     ||.....|.....|.......:         |:|.|.|....:|.:.|
Mosquito   416 GVSPTPCPYTTP-----TNPYMYHHRAAAEPCTAMSSSI---------ATLRLKAKQHTSGFSSP 466

  Fly   480 -SYHPLLDAANAAGAGA 495
             |....:..:|:||..|
Mosquito   467 YSASSPVSRSNSAGLSA 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vsx2NP_001284897.1 Homeodomain 230..287 CDD:459649 29/56 (52%)
OAR 556..572 CDD:461067
Ptx1XP_061519626.1 None
Blue background indicates that the domain is not in the aligned region.

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