Sequence 1: | NP_001284897.1 | Gene: | Vsx2 / 31469 | FlyBaseID: | FBgn0263512 | Length: | 645 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002937009.3 | Gene: | lhx4 / 100497384 | XenbaseID: | XB-GENE-492744 | Length: | 376 | Species: | Xenopus tropicalis |
Alignment Length: | 242 | Identity: | 63/242 - (26%) |
---|---|---|---|
Similarity: | 92/242 - (38%) | Gaps: | 68/242 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 231 RHSRTIFTSYQLEKLEEAFKEAHYPDVYAREMLSLKTELPEDRIQVWFQNRRAKWRKTEKVWGGS 295
Fly 296 TIMAEYGLYGAMVRHSLPLPDTILKSAKDNDAVAPWLLGMEQKCMHRKSIEAQSALKDDSGVSDH 360
Fly 361 EDSAGSKSAHSEDLSRSRCHA-----------------LSSSTESLNVVSP-----APSSCPTSA 403
Fly 404 STSAPPTSTSGYAGAASS-----AATTPTGASTTNSSSSPHIELGSP 445 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Vsx2 | NP_001284897.1 | Homeobox | 233..286 | CDD:278475 | 26/52 (50%) |
OAR | 556..570 | CDD:281777 | |||
lhx4 | XP_002937009.3 | LIM1_Lhx4 | 30..81 | CDD:188852 | |
LIM2_Lhx3_Lhx4 | 89..144 | CDD:188762 | |||
Homeobox | 160..214 | CDD:395001 | 26/53 (49%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1174754at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.010 |