DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12730 and cmtm4

DIOPT Version :10

Sequence 1:NP_572228.1 Gene:CG12730 / 31466 FlyBaseID:FBgn0029771 Length:148 Species:Drosophila melanogaster
Sequence 2:NP_001002492.1 Gene:cmtm4 / 436765 ZFINID:ZDB-GENE-040718-195 Length:208 Species:Danio rerio


Alignment Length:143 Identity:42/143 - (29%)
Similarity:61/143 - (42%) Gaps:25/143 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 DRKYLLSMPGLCK---LACLLCSFVGI----LCIICGPVRVSNFRGSFYLAVVTIGFVATGCLLL 67
            ||:||.|..|:.|   :...|.||:.|    :|..|..|.:..|       |....||.||.|||
Zfish    46 DREYLKSHFGILKVIEVVLALISFIFIETIMMCSPCAGVYLFEF-------VSCSAFVVTGVLLL 103

  Fly    68 ARYLRLWQRQFCRCDPTL-WSLA--VHSSLALAYFTASGLVLSL---DIGAYTAAAFFGLTAFCI 126
            ...|.|..:.     |.: |||.  ::::.:..:|..:.:||:.   ..||..||..||.....:
Zfish   104 IFSLNLHTKV-----PHINWSLTDLINTATSTFFFFLASVVLAALNHQSGAEIAAVIFGFLVMAV 163

  Fly   127 NGLEAYGNYRRSR 139
            ..|..:...||.|
Zfish   164 YALNTFLASRRWR 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12730NP_572228.1 None
cmtm4NP_001002492.1 MARVEL 49..170 CDD:366555 37/132 (28%)

Return to query results.
Submit another query.