DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12730 and cmtm6

DIOPT Version :10

Sequence 1:NP_572228.1 Gene:CG12730 / 31466 FlyBaseID:FBgn0029771 Length:148 Species:Drosophila melanogaster
Sequence 2:NP_001038221.1 Gene:cmtm6 / 368348 ZFINID:ZDB-GENE-030729-15 Length:189 Species:Danio rerio


Alignment Length:122 Identity:34/122 - (27%)
Similarity:48/122 - (39%) Gaps:24/122 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 KLACLLCSFVGIL-------CIICGPVRVSNFRGSFYLAVVTIGFVATGCLLLARYLRLWQRQFC 79
            |:..:|.|||..:       |..|||:       .|:..|....|:.|..||:.....|.||...
Zfish    40 KVVEMLLSFVAFVMEEVVSHCASCGPL-------YFFEFVSCTAFLFTLLLLILLATSLHQRVGI 97

  Fly    80 RCDPTL-----WSLAVHSSLALAYFTASGLVLSLDIGA-----YTAAAFFGLTAFCI 126
            :|.|||     ..:||...:|...|.|......|:.||     .:..|||...|:.:
Zfish    98 KCWPTLDFTYTSGMAVMFLIASIVFAAGNGRTGLEQGAVAFGFMSTIAFFAEAAYFV 154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12730NP_572228.1 None
cmtm6NP_001038221.1 MARVEL 34..152 CDD:366555 33/118 (28%)

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