DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12730 and Cmtm6

DIOPT Version :9

Sequence 1:NP_001284896.1 Gene:CG12730 / 31466 FlyBaseID:FBgn0029771 Length:148 Species:Drosophila melanogaster
Sequence 2:NP_001007803.1 Gene:Cmtm6 / 316035 RGDID:1307765 Length:183 Species:Rattus norvegicus


Alignment Length:90 Identity:22/90 - (24%)
Similarity:30/90 - (33%) Gaps:30/90 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GTQDYDRKYLLSMPGLCKLACLLCSFVGILCIICGP------VRVSNFRGSFYLAVV-------- 55
            |...:.|:.|..:..|..|...:|..|...|.:||.      |..|.|..|..|.:|        
  Rat    32 GRLPWYRRILKGLQLLLSLLAFICEEVVSECGLCGGLYFFEFVSCSAFLLSLLLLIVYCTAVYDR 96

  Fly    56 -------------TIGFVATGCLLL 67
                         |:|   |||:.|
  Rat    97 VDTGKVKSSDFYITLG---TGCVFL 118



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4788
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22776
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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