DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12730 and Cmtm8

DIOPT Version :10

Sequence 1:NP_572228.1 Gene:CG12730 / 31466 FlyBaseID:FBgn0029771 Length:148 Species:Drosophila melanogaster
Sequence 2:NP_942049.1 Gene:Cmtm8 / 301045 RGDID:735040 Length:173 Species:Rattus norvegicus


Alignment Length:150 Identity:38/150 - (25%)
Similarity:66/150 - (44%) Gaps:28/150 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 YDRKYLLSMPGLCKLACLLCSFVGIL--CIICGP--VRVSNFRGSFYLA----VVTIGFVATGCL 65
            |||::|.:.|||..:|.::   :|:|  .:|.|.  .||..|....::|    |:|:.|:..  .
  Rat    32 YDREFLRTPPGLLIIAEIV---LGLLVWTLIAGTEYFRVPAFGWVMFVAVFYWVLTVFFLIV--Y 91

  Fly    66 LLARYLRLWQRQFCRCDPTLWSLAVHSSLALAYFTASGLVLSL--------DIGAYTAAAFFG-L 121
            :...|.|:.|..:     |...|..:.|....||:|:.:..|.        :..::.|::||. |
  Rat    92 ITMTYTRIPQVPW-----TTVGLCFNGSACALYFSAAIVDASSVSPEKEGHNFNSWAASSFFAFL 151

  Fly   122 TAFCINGLEAYGNYRRSRQR 141
            ...|..| ..|.::...|.|
  Rat   152 VTICYAG-NTYFSFIAWRSR 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12730NP_572228.1 None
Cmtm8NP_942049.1 MARVEL 36..162 CDD:366555 32/136 (24%)

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