DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12730 and Cmtm8

DIOPT Version :9

Sequence 1:NP_001284896.1 Gene:CG12730 / 31466 FlyBaseID:FBgn0029771 Length:148 Species:Drosophila melanogaster
Sequence 2:NP_942049.1 Gene:Cmtm8 / 301045 RGDID:735040 Length:173 Species:Rattus norvegicus


Alignment Length:150 Identity:38/150 - (25%)
Similarity:66/150 - (44%) Gaps:28/150 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 YDRKYLLSMPGLCKLACLLCSFVGIL--CIICGP--VRVSNFRGSFYLA----VVTIGFVATGCL 65
            |||::|.:.|||..:|.::   :|:|  .:|.|.  .||..|....::|    |:|:.|:..  .
  Rat    32 YDREFLRTPPGLLIIAEIV---LGLLVWTLIAGTEYFRVPAFGWVMFVAVFYWVLTVFFLIV--Y 91

  Fly    66 LLARYLRLWQRQFCRCDPTLWSLAVHSSLALAYFTASGLVLSL--------DIGAYTAAAFFG-L 121
            :...|.|:.|..:     |...|..:.|....||:|:.:..|.        :..::.|::||. |
  Rat    92 ITMTYTRIPQVPW-----TTVGLCFNGSACALYFSAAIVDASSVSPEKEGHNFNSWAASSFFAFL 151

  Fly   122 TAFCINGLEAYGNYRRSRQR 141
            ...|..| ..|.::...|.|
  Rat   152 VTICYAG-NTYFSFIAWRSR 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12730NP_001284896.1 None
Cmtm8NP_942049.1 MARVEL 36..162 CDD:279608 32/136 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4788
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22776
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.000

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