DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12730 and Cmtm3

DIOPT Version :9

Sequence 1:NP_001284896.1 Gene:CG12730 / 31466 FlyBaseID:FBgn0029771 Length:148 Species:Drosophila melanogaster
Sequence 2:NP_001099634.1 Gene:Cmtm3 / 291813 RGDID:1308763 Length:184 Species:Rattus norvegicus


Alignment Length:132 Identity:38/132 - (28%)
Similarity:53/132 - (40%) Gaps:27/132 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 RKYLLSMPGLCKLACLLCSFVGILCIICGPVRVSNFRGSFYLAVVTIGFVATGCLLLARYLRL-- 73
            |.:|.|:.|...||....||:..:|.:     ||:  .|.:|.|..:.|:.....|.|..::|  
  Rat    34 RAFLCSLKGRLLLAESGLSFITFVCYV-----VSS--ASAFLTVPLLEFLLAIYFLFADAMQLND 91

  Fly    74 -WQ------RQFCRCDPTLWSLAVHSSLALAYFTAS-GLVLSLDIGAYTAAAFFGLTAFCINGLE 130
             ||      ..|.||          .:.||.||..| ..|.....|||.||..||..|..:..::
  Rat    92 KWQGLCWPMMDFLRC----------VTAALIYFVISITAVAKYSEGAYKAAGVFGFFATIVFAID 146

  Fly   131 AY 132
            .|
  Rat   147 FY 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12730NP_001284896.1 None
Cmtm3NP_001099634.1 MARVEL 36..149 CDD:366555 37/130 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4788
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22776
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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