DRSC/TRiP Functional Genomics Resources

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Protein Alignment frma and Nepl20

DIOPT Version :9

Sequence 1:NP_572226.2 Gene:frma / 31464 FlyBaseID:FBgn0029769 Length:611 Species:Drosophila melanogaster
Sequence 2:NP_651645.1 Gene:Nepl20 / 43412 FlyBaseID:FBgn0039613 Length:700 Species:Drosophila melanogaster


Alignment Length:714 Identity:151/714 - (21%)
Similarity:280/714 - (39%) Gaps:162/714 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ELIVGLLVVQVKS--HPQADPCQNFYKVACGNWSASHA--------TDSYESFMDRLDYNYQEKL 63
            ||:......:::|  :.:.|||::||..:|||:...::        |..:|:....|:    .|:
  Fly    38 ELMRQAKAAEIESFMNQKVDPCKDFYAFSCGNYKRINSALNMRVLTTGVFETLTKGLN----RKI 98

  Fly    64 ADLLDNERED-DEPHFLQQLRNFYTACR--KPLS---QDQVLRILEHLIVMENIQNEELS----- 117
            ..:|:...:. |.|..: |:::||.:|.  |.|:   .:::.|::.....|..::.....     
  Fly    99 LKMLNTPHDSHDTPEDI-QVKHFYESCLQIKELNSTYSEKLKRLIAEFGTMPLLEGSSWQEDDFD 162

  Fly   118 -----------VGLTAAFRLQVLIDL--NDSNTYDIWKQ---LMSHRKHWDPNTT-------NRE 159
                       .|:.:...:.|..|.  |..|...|.:|   |.:...:.|..|.       |..
  Fly   163 WLNTTARMAHRYGIMSIIGVGVATDFANNQKNIIYINQQEFPLKTRSMYMDNETAIYRQNYQNNI 227

  Fly   160 PLTREMF----DKLWASLPKIPFPF------------KEYYWREL------SELEEKIMSYGSED 202
            .|..|.:    |:|.....|..|.|            |....|:|      :||.|:   |... 
  Fly   228 QLILEKYLGVKDELARKAAKEMFEFEVDLAHGLVDNNKHLNLRDLIELLTVAELRER---YAPT- 288

  Fly   203 DGFDSGDLVTRIPPFWMMPWPNGNITYE-------NLSQMAHWLDIKANEFILTYIYMRLKLVAE 260
              .|:..|:     |..|.....:..||       ||.::   ::......:..|:::|  |:.|
  Fly   289 --LDTDQLI-----FVSMGEKISDKVYEYNRRYQQNLVEV---IERTPKSTVANYLFLR--LIWE 341

  Fly   261 GVSTESWHIDR--DQCAEQSRQILSHPAAWLVEKNHPRLKEEPVLQDIFAELKQRFGQKLLAN-- 321
            .:...|...::  :.|.:.::...:.....::.:.:...|....:..::.:||..|.:.||::  
  Fly   342 FIQKPSGVAEKPTEACVDFTKTYFAKNLDNMIYRRYKNEKSSREIDSMWHQLKSTFKETLLSSPA 406

  Fly   322 RNNFTRSTQHFLLGKLKRMRLRLSILPRNSSAQSMVRRIERHYRDVHMNASDYFGNLHIGLNHSR 386
            .:....||:...:.||:.|.|.::...:.:..:        .:.|:::..:|...||        
  Fly   407 LDWIEPSTRSLAIAKLEAMTLEVNNYVKENFTE--------EFADLNLQNTDCVENL-------- 455

  Fly   387 SHKKYAQLWAIVFGRQLI--PSRISKSDLYPTQVRGYGTYASAFYIVKQNMLIVPLSLLEPPFYT 449
               :..|:......|||.  |::       |.:.....:|..: .|:.:|.:.||::||: |||.
  Fly   456 ---RQVQMLQAKQMRQLYHQPAK-------PLEAGELLSYTPS-NILLENSIKVPVALLQ-PFYI 508

  Fly   450 HGQ--PSILTYSALGFILGHELSHGFDSEGMTFSSHGVGSSAVDRELDRNPRFQQELGCLRRRFG 512
            ...  |:.:.:..|.:::||||.||||..|..|...|......|.:...|  |.:...|..:::|
  Fly   509 WSDVYPNAVMFGTLAYLIGHELIHGFDDSGRKFDEKGNSKDWWDEKSSSN--FLKRRDCFTKQYG 571

  Fly   513 RKRY------------EKFADASGLELAYSAYFDTAQTDHKRNRSAEELV---------TQKQQF 556
            |..|            |..||..|:.|||:||....:........|:::.         |.||.|
  Fly   572 RYVYDGIQLKESTAQSENIADNGGMRLAYTAYRKWYENQLTLPNGAQDMTKETLPNLRYTAKQLF 636

  Fly   557 FHNFAQFFCSD-----KEL-LQAHDHGSDRKRVNDAVAHFEPFREAFSCGPSPRR---RQCRLY 611
            |.:|||.:|:|     |.| :...||...:.||...:::||.|.:.|:|......   .:|.||
  Fly   637 FISFAQSWCNDVHPKVKALQVSTDDHMPGKFRVIGTLSNFEEFSKEFNCHAGSAMNPIEKCILY 700

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
frmaNP_572226.2 GluZincin 25..601 CDD:301352 145/681 (21%)
Nepl20NP_651645.1 PepO 50..691 CDD:226118 146/691 (21%)
M13 56..697 CDD:189000 145/691 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454907
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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