DRSC/TRiP Functional Genomics Resources

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Protein Alignment frma and Nepl17

DIOPT Version :9

Sequence 1:NP_572226.2 Gene:frma / 31464 FlyBaseID:FBgn0029769 Length:611 Species:Drosophila melanogaster
Sequence 2:NP_651641.1 Gene:Nepl17 / 43408 FlyBaseID:FBgn0039609 Length:681 Species:Drosophila melanogaster


Alignment Length:676 Identity:148/676 - (21%)
Similarity:262/676 - (38%) Gaps:142/676 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 PCQNFYKVACGNWSASHATDSYE--SFMDRLDYNYQEKLADLLDNEREDDEPHFLQQLRNFY--- 86
            ||.:||..||||::..:|..|.:  :....:..||..::..:|:..|...:.....:::.||   
  Fly    57 PCDDFYGYACGNYATINAATSQKDTNIRQLMFANYLRRVRQVLNEPRISTDRPMEVRVKYFYESC 121

  Fly    87 --TACRKPLSQDQVLRILEHLIVMENIQNE----------ELSVGLTAAF--------------- 124
              ||..:...:..:|.:|.....|..::.:          |:...|...:               
  Fly   122 LDTAALRTKQRSHLLSVLREFGGMPAVEGKSWDYVGFDAIEMMAQLLRRYGKLTLLGVYVVPDHF 186

  Fly   125 -----RLQV--LIDLNDSNTY-DIWKQL-----------MSH---RKHWDPNTTNREPLTREMFD 167
                 |||:  .:||.:|:.: .:||:.           :|.   ||..:........|:|..||
  Fly   187 NSQIKRLQLGQRLDLAESDEFASLWKKYALKMRLRNLLGLSEELARKTAEEIIELELELSRSAFD 251

  Fly   168 KLWASLPKIPFPFKEYYWRELSELEEKIMSYGSEDDGFDSGDLVTRIPPFWM-----MPWPNGNI 227
            ......|::        .|.|:.|.....:||...:       |||....|:     :|      
  Fly   252 HRMNRDPRL--------MRHLTMLSNMSDAYGPILN-------VTRFVTSWLGSEYNLP------ 295

  Fly   228 TYEN----LSQMAHWLDIKANEFILTYIYMRLKLVAEGVSTESWH--IDRDQCAEQSRQILSHPA 286
            .:|:    |.|:...|....|..:..|:...|....|..:.|...  |..::..|....::.|..
  Fly   296 VFESVPSYLFQVKKILLSTPNHVVANYMLSSLLTDFEITANEEQQKVICHERITELFPDVVDHMV 360

  Fly   287 AWLVEKNHPRLKEEPVLQDIFAELKQRFGQKLLA-NRNNFTRSTQHFLLGKLKRMRLRLSILPRN 350
            ...:|:.:|.:..|  ::.::.|||..|.:.|.: :.....:.|:..||.||..|...:      
  Fly   361 YHSLEQQNPYIANE--MRSLWVELKSSFREMLSSPDIEWLEKQTREELLEKLNGMSFEI------ 417

  Fly   351 SSAQSMVRRIERHYRDVHMNASDYFGNLHIGLNHSRSHKKYAQLWAIVFGRQLIPSRISKSDLYP 415
              |.......|..:.|:.::::||:||:...|.                    :.:||.::||..
  Fly   418 --AGGQAVNFEEQFGDLVVSSADYYGNIQRLLE--------------------VKARILRTDLLR 460

  Fly   416 TQVRGY---GTYASAFYIVKQNMLIVPLSLLEPPF-YTHGQPSILTYSALGFILGHELSHGFDSE 476
            .....|   |..|:..|..:.|::::|:|.::..: :....|:.|.|..|||.:.||::||||..
  Fly   461 ESSSVYYYHGVTATPIYETETNLVVLPVSYMQHRYLWDDIYPAALKYGTLGFTMAHEMAHGFDDL 525

  Fly   477 GMTFSSHG------VGSSAVDRELDRN---PRFQQEL-GCLRRRFGRKRYEKFADASGLELAYSA 531
            ...:.|.|      ...:.|..||.:|   .:|...| |.||.|..:.:.|..||..|:.:|.||
  Fly   526 NRLYDSRGNLNDNWSTQTKVGFELVKNCLADQFSGMLYGNLRLRRLKSQAESIADNVGIRIAQSA 590

  Fly   532 YFD-TAQTDHKRNRSAEELVTQKQQ-FFHNFAQFFCSD------KELLQAHDHGSDRKRVNDAVA 588
            |:. ..|.:.:...|...:....:| ||.:.|||.|||      ...::.:.|.....||...:.
  Fly   591 YWKWLDQVEMEETESLPHMTQSPEQLFFLSAAQFMCSDIYPERRANFVRNNFHPPYEARVFAMMI 655

  Fly   589 HFEPFREAFSCGPSPRR---RQCRLY 611
            :...|.|||.|..|.:.   .:|.:|
  Fly   656 NSPAFAEAFQCSNSSKMNPPNKCLMY 681

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
frmaNP_572226.2 GluZincin 25..601 CDD:301352 145/661 (22%)
Nepl17NP_651641.1 PepO 49..672 CDD:226118 146/665 (22%)
M13 55..678 CDD:189000 146/671 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45469652
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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