DRSC/TRiP Functional Genomics Resources

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Protein Alignment frma and Nep4

DIOPT Version :9

Sequence 1:NP_572226.2 Gene:frma / 31464 FlyBaseID:FBgn0029769 Length:611 Species:Drosophila melanogaster
Sequence 2:NP_650904.3 Gene:Nep4 / 42449 FlyBaseID:FBgn0038818 Length:1040 Species:Drosophila melanogaster


Alignment Length:836 Identity:165/836 - (19%)
Similarity:276/836 - (33%) Gaps:289/836 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 GLLVVQVKS-----HPQADPCQNFYKVACGNWSASH-------ATDSYESFMDRLDY-------- 57
            |:.:.|.|:     ..:.|||.:|||.|||||...|       ..|::|...:.||.        
  Fly   257 GIRMTQAKTMKRYMDNKVDPCVDFYKYACGNWERLHPIPKDKAGFDTFEMLRESLDLVLRNLLEK 321

  Fly    58 ----------------NYQEKLADLLDNEREDDEPHFL--QQLRNFYTACRKPLSQDQV------ 98
                            |...||.:..:.|.|.|:...|  ::||....:.|:.|::..|      
  Fly   322 NTPVHSAAELRKSPVRNTLFKLNEQGEGEGEADQAAELTAERLRRHIVSKRQLLNRVLVRYKRYT 386

  Fly    99 -----LRILEHLIVMENIQNEELSVGLTAAFRLQVLIDLNDSNTYDIWKQLMSH------RKHWD 152
                 .|::|  ...|..:.||.:..:       ||......:..|..:||  |      :.|.|
  Fly   387 NGTKRKRLIE--TPRERTKEEEAAPPV-------VLPKDKTKDKSDNEEQL--HVPTDFLKPHQD 440

  Fly   153 P---------NTTNREPLTREMFDKLWASLPKI-PFPFKEYYWRE-------------------- 187
            .         :..|...|.:...:.|...:.:: .:|..|..|.|                    
  Fly   441 AQLKAKNLYRSCVNSAVLAKRGLEPLHTLIRELGGWPVLESQWSESNFNWQVLAATLRRYNNDIL 505

  Fly   188 --------LSELEEKIMSYGSEDDGFDSGDLVTRIPPFWMMPWPNGNITY-----ENLSQMAHWL 239
                    :...||.|:.:.....|     |.||  .:::.|   .|..|     ..::::.|.:
  Fly   506 IVQWVGADIKNSEENIVQFDQTGLG-----LPTR--EYFLQP---SNAKYLQAYQRYMAEVMHKM 560

  Fly   240 DIK-------ANEFI------------------LTYIYMRLKL-VAEGVSTE-SWHIDRDQCAEQ 277
            ...       |:|.:                  :|.:|.|:.| ..:.|..| .|.......  |
  Fly   561 GASKADAQRVASELVAFETQLAGITAPAEQRLNVTKLYKRMTLDQLQAVVPEIKWRAYLQSL--Q 623

  Fly   278 SRQILS------------HPAAWLVEKNHPRLKEEPVL-----------QDIFAELKQRFGQKLL 319
            .|::|.            .....|:::..||.....::           .|.|.::||.|...|.
  Fly   624 DREVLGTEEVVIYAVEYMSKLVTLLDETDPRTVSNYMMWRFVRHRINNVDDRFDDIKQSFYHALF 688

  Fly   320 ANRNNFTR---------STQHFLLGKL----------KRMRLRLSILPRNSSAQSMVRRIERHYR 365
            ....:..|         :.....:|.:          ||..||            |...:::.:|
  Fly   689 GREESPQRWKVCIAQVNTNMGMAVGSMFVSRYFDNNSKRDTLR------------MTHDLQQAFR 741

  Fly   366 DVHMNASDYFG--------------NLHIG-----LNHSRSHKKYAQLWAIVFGRQLIPSRISKS 411
            |: :..:|:..              :|.||     ||.|..:.|||       |.::.|.:..::
  Fly   742 DI-LKTTDWLDDTTKQLAEEKVNAMSLKIGYPDFILNPSELNSKYA-------GIEIYPEKYFEN 798

  Fly   412 DL------------------YPTQVRGYGTYASAFYIVKQNMLIVPLSLLEPPFYTHGQPSILTY 458
            .|                  ..|..:......:|:|...:|.::.|..:|:||||....|..|.:
  Fly   799 TLNVLLHTAKTEQAKLHERVNKTNWQTAPAIVNAYYSRNKNQIMFPAGILQPPFYHRHFPKSLNF 863

  Fly   459 SALGFILGHELSHGFDSEGMTFSSHG------VGSSAVDRELDRNPRFQQELGCLRRRFGR---- 513
            ..:|.::||||:||||.:|..|..:|      ..||.  |..|...|      |:..::..    
  Fly   864 GGIGVVIGHELTHGFDDKGRLFDRNGNIHKWWTDSSI--RGFDERAR------CIIAQYSNYTVE 920

  Fly   514 ----------KRYEKFADASGLELAYSAYFDTAQTDHKRNRSAEEL----VTQKQQFFHNFAQFF 564
                      .:.|..||..||..|:.|| .....:|....|.|.|    :|..|.||.||.|.:
  Fly   921 EVGIVLNGESTQGENIADNGGLRQAFHAY-QRWLKEHPSEVSDEILPGLNMTGPQLFFLNFGQVW 984

  Fly   565 C------SDKELLQAHDHGSDRKRVNDAVAHFEPFREAFSC---GPSPRRRQCRLY 611
            |      :.:..|....|...|.||...:::...|...|:|   .|...:::|.::
  Fly   985 CGAMRPEAIRNKLNTAIHSPGRFRVIGTLSNSVDFAREFNCPLGSPMNPQKKCSVW 1040

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
frmaNP_572226.2 GluZincin 25..601 CDD:301352 160/807 (20%)
Nep4NP_650904.3 M13 274..1038 CDD:189000 161/815 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454865
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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