DRSC/TRiP Functional Genomics Resources

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Protein Alignment frma and Nepl6

DIOPT Version :9

Sequence 1:NP_572226.2 Gene:frma / 31464 FlyBaseID:FBgn0029769 Length:611 Species:Drosophila melanogaster
Sequence 2:NP_609023.3 Gene:Nepl6 / 33893 FlyBaseID:FBgn0259716 Length:655 Species:Drosophila melanogaster


Alignment Length:703 Identity:165/703 - (23%)
Similarity:279/703 - (39%) Gaps:151/703 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LIVGLLVVQVKSHP-----QADP------------------CQNFYKVACGNWSASHATDSYESF 51
            ||..|.:|.:.:.|     :|||                  |..:::.|||.::..|..|.:...
  Fly     3 LIACLFIVPICAAPTTQNVEADPNSRLMNNILSYVAEDSSACGTYFQYACGKYAVRHRDDPFTEI 67

  Fly    52 MDRLDYNYQEKLADLL-DNEREDDEPHFLQ-----QLRNFYTACRK------------------- 91
            :..||:.....|..|: :..:....|.|.:     ::.:||..||:                   
  Fly    68 IQMLDHKVNGNLVQLMHELHQRSQSPGFNESSVEAKVLHFYRTCREAPPSTRKMEHYLRLAPPGQ 132

  Fly    92 --------------PLSQDQVLRILEHLIVMENIQNEELSVGLTAAFRLQVLIDLNDSNTYDIWK 142
                          |.:|.:.::.|.||          ...|.|... :.||:..:..|      
  Fly   133 ALTWPQFMPRGEPWPKAQFKWMKSLGHL----------YRYGFTNVL-VNVLVLRSSEN------ 180

  Fly   143 QLMSHRKHWDPNTTNREPLTREM--FDKLWASLPKIPFPFKEY--YWRELSELEE--KIMSYGSE 201
               |:|...|.:..:.|...:.:  |....|:|..|..|.|..  ..|::..||.  ::::...:
  Fly   181 ---SNRFRLDISMPSLEGDAQHLGGFLSTLATLQIIGVPTKSILPLVRKIRRLESAIRVLTEVDD 242

  Fly   202 DD-------------------GFDSGDLVTRIPPFWMMPWPNGNITYENLSQMAHWLDIKANEFI 247
            ||                   ||....:...:...::|...|... :..|.::   :|....|.:
  Fly   243 DDESETWTLRQWEYKTGYAWQGFVESIVGHSVSHHYVMQAQNAKY-FTGLKRL---MDSTDAEVV 303

  Fly   248 LTYIYMR--LKLVAEGVSTESWHIDRDQCAEQSRQILSHPAAWLVEKNHPRLKEEPVLQD----- 305
            ..||..|  |.|:.:.:.:.. |||   |....|:.::..:..|.::   |..:...||.     
  Fly   304 ANYIMTRFVLYLIDDFIDSNE-HID---CVTDMRRNMNLASNLLYKE---RFLDPATLQQYTQEV 361

  Fly   306 --IFAELKQRFGQKLLANRNNFTRSTQHFLLGKLKRMRLRLSILPRNSSAQSMVRRIERHYRDVH 368
              :|.:|:::|..::..||...|......:..|.:.:.|.:..|||....:|.|   .|||.|:.
  Fly   362 TKVFEQLRRQFLLQINENRLGLTSEQNSMVATKAQHVVLNIGNLPRGRDHRSFV---SRHYEDLV 423

  Fly   369 MNASDY-FGNLHIGLNHSRSHKKYAQLWAIVFGRQLIPSR---ISKSDLYPTQVRGYGTYASAFY 429
            ....|: :...|:.|...|:.|:..||      .|..|:.   ...||  |......|.|    |
  Fly   424 FPLPDFDYAREHLNLLEFRTRKQVLQL------NQSAPTPDEFFYLSD--PKTAMSSGPY----Y 476

  Fly   430 IVKQNMLIVPLSLLEPPFYTHGQPSILTYSALGFILGHELSHGFDSEGMTFSSHGVGSSAVDREL 494
            :::.|:::||..||:.||:......|..||.|||:|.|||.|..|:.|:.:..:| ....:..::
  Fly   477 LMRLNIIVVPHGLLQEPFFAADSHDIFKYSLLGFVLAHELMHSVDTVGLYYDRYG-NIHEIGPQI 540

  Fly   495 DRNPRFQQELGCLRRRFGRKRYEKFADASGLELAYSAYFDTAQTDHKRNRSAEELVTQKQQFFHN 559
            ..:|||...|.||.|...:...|:.||.:||:||||.||   |...:.:.:....:..:|.||.|
  Fly   541 SSSPRFVAGLQCLNRNSTQYLDERIADIAGLDLAYSTYF---QNSSQMSLTDFTTIPPQQIFFLN 602

  Fly   560 FAQFFCSDKELLQAHDHGSDRKRVNDAVAHFEPFREAFSC-GPSPRRRQCRLY 611
            .|||||.|.:.:....|.:|..|:...:..|.||.|||.| ..|.:..:|:|:
  Fly   603 LAQFFCGDGDPINFVGHDNDETRLQQMLNGFAPFHEAFGCPAKSNQPEKCQLW 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
frmaNP_572226.2 GluZincin 25..601 CDD:301352 157/671 (23%)
Nepl6NP_609023.3 M13 42..653 CDD:189000 155/660 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45469643
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006719
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.940

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