DRSC/TRiP Functional Genomics Resources

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Protein Alignment frma and Nepl4

DIOPT Version :9

Sequence 1:NP_572226.2 Gene:frma / 31464 FlyBaseID:FBgn0029769 Length:611 Species:Drosophila melanogaster
Sequence 2:NP_609019.1 Gene:Nepl4 / 33889 FlyBaseID:FBgn0031805 Length:652 Species:Drosophila melanogaster


Alignment Length:637 Identity:146/637 - (22%)
Similarity:256/637 - (40%) Gaps:117/637 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 QADPCQNFYKVACGNWSASHATDSYESFMDRLDYN--YQEKLADLLDNER--EDDEPHFLQQLRN 84
            :.:||::||..|||.|.|.|.:.:..:.:.....|  |::....||.|..  |...|.|.:.|.:
  Fly    57 EKNPCEDFYAYACGKWRAKHGSHTTATMISESQINRQYEDLFLQLLRNPSAPEYGYPMFAKVLAH 121

  Fly    85 FYTACRKPLSQDQVLRILEHLIVMENIQNEELSVGLTAAFRLQVLIDLNDSNTYDIWKQ------ 143
             |.:| ..|.:..:.|.:|.|       :.:|...|.:...:.:|..|.....:..:.|      
  Fly   122 -YQSC-IALEKPDLRRYIELL-------DRDLLASLNSTHWMHLLAALGRYGYHGHYVQVEVRWY 177

  Fly   144 --------LMSHRKHWDPNTTNREPLTREMFDKL------WASLPKIPFPFKEYYWRELSELEEK 194
                    |:.|.:|.:.:      ||::::|.|      |..|.::...|:        .||:.
  Fly   178 NATHHMIFLLPHNRHLNLS------LTQDIYDALSQDGSSWPPLHQLQEQFR--------SLEQN 228

  Fly   195 IMSYG---SEDDGFDS---GDLVTRIPPFWMMPWPN-----------GNITY--------ENLSQ 234
            ::...   |.||.|.:   ..:.|.:|.   :.|..           ||..:        |.|.:
  Fly   229 LVRLAKPHSADDTFRNYSLDQIRTEVPG---LHWDEALRTQLGRSVPGNHVFQVDDLDAIEGLVE 290

  Fly   235 MAHWLD-IKANEFILT-YIYMRLKLVAEGVST-ESWHIDRDQ-CAEQSRQILSHPAAWLVEK--- 292
            ..:.:| :..|.:.|. ::...|:|....::| ||....|.: |....|:.:..|..::.|:   
  Fly   291 YLNTVDTLLLNRYSLARFLSHLLELPHNPLATWESGQRSRGRNCIRHMRRSVYLPMNYVYERSFY 355

  Fly   293 NHPRLKEEPVLQDIFAELKQRFGQKLLANRNNFTRSTQHFLLGKLKRMRLRLSILPRNSSAQ--- 354
            :..|..:|.|:..:|.:|:.:...::..|..|.::.....|..|:.:||:.:..||.|.:.|   
  Fly   356 SRRRHADELVIHSVFQQLQSQLELRVQHNAFNLSQDLVKSLQAKVHQMRINVGNLPPNVTEQFYW 420

  Fly   355 SMVRR--IERHYRDVHMNASDYFGNLHIGLNHSRSHKKYAQLWAIVFGRQLIPSRISKSDLYPTQ 417
            ...||  :.|.:.:.|:|:..|:..|...| .|.|.::...:|.         |....:..:|..
  Fly   421 DSDRRWSVGRDFYENHLNSLLYYYTLVADL-ESSSDQEERDIWY---------SFNMHTPEFPDN 475

  Fly   418 VRGYGTYASAFYIVKQNMLIVPLSLLEPPFYTHGQPSILTYSALGFILGHELSHGFDSEGMTFSS 482
            :.     |:.::....|::.||.|.::.||:.......|.|..|...||||:.|.||::.:.:.:
  Fly   476 ID-----ATPYFYCLGNIIFVPYSYVKRPFFDANFWPALLYGDLANTLGHEIMHAFDTDLVDYDA 535

  Fly   483 HGVGSSAVDRELDRNPRFQQELGCLRRRFGRKRYEKFADASGLELAYSAYFDTAQTDHKRNRSAE 547
            .|...:..| :|.....:...:|||... .....|:.:|.||..||...|.....|.....|   
  Fly   536 QGNLRNFSD-QLGEVELYNGAVGCLNSS-AVMLNERTSDVSGSRLAMQTYGGDWLTRSGNGR--- 595

  Fly   548 ELVTQKQQFFHNFAQFFCSDKELLQAHDHGSDRKRVNDAVAHFEPFREAFSC 599
                   .:|..||.|||.| |..|.||.||  :|:|.|:.....|.|.|.|
  Fly   596 -------LYFLQFAHFFCGD-EGDQYHDSGS--QRLNYALGQVPQFAEVFRC 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
frmaNP_572226.2 GluZincin 25..601 CDD:301352 146/636 (23%)
Nepl4NP_609019.1 PepO 51..643 CDD:226118 146/637 (23%)
GluZincin 59..649 CDD:301352 146/635 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006719
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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