DRSC/TRiP Functional Genomics Resources

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Protein Alignment frma and Nep3

DIOPT Version :9

Sequence 1:NP_572226.2 Gene:frma / 31464 FlyBaseID:FBgn0029769 Length:611 Species:Drosophila melanogaster
Sequence 2:NP_001245775.1 Gene:Nep3 / 33005 FlyBaseID:FBgn0031081 Length:786 Species:Drosophila melanogaster


Alignment Length:724 Identity:138/724 - (19%)
Similarity:265/724 - (36%) Gaps:199/724 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 DPCQNFYKVACGNWSASHATDSYES---FMDRLDYNYQEKLADLLDNEREDDEPHFLQQLRNFYT 87
            |||.:||..:|..|..::.....:|   ...:|:...|..:.::|:...:..:....::.:.:|.
  Fly   124 DPCDDFYGYSCNQWIKNNPIPEGKSTWGTFGKLEQMNQLIIRNVLEKPAKSFKSDAERKAKVYYE 188

  Fly    88 AC-----------RKPLSQDQVLRILEHLIVMENIQNEELSVGLTAAFRLQVLIDLNDSNTYDIW 141
            :|           .||:: |.:|:|....:..........::|.|    |::|.:..:.|....|
  Fly   189 SCLDADEHMEKLGAKPMN-DLLLQIGGWNVTKSGYNVANWTMGHT----LKILHNKYNFNCLFGW 248

  Fly   142 ------KQLMSH-------------RKHWDPNTTNREPLTREM---------------------- 165
                  |....|             ..:::..|.|...:..|.                      
  Fly   249 AIGEDDKNSSRHVIQIDQGGLTLPTADYYNNKTDNHRKVLNEYIEYMTKVCVLLGANESDARAQM 313

  Fly   166 -----FDKLWASLPKIPFPFKE-------YYWRELSELEEKIMSYGSEDDGFDSG---------- 208
                 |:|   .|..|..|.::       |:..:|.:| .|:..:.:..|.||:.          
  Fly   314 IGVINFEK---KLANITIPLEDRRNEEAMYHPMQLRQL-SKLAPFLNWTDHFDNAMQMVGRRVTD 374

  Fly   209 --DLVTRIPPFW---------MMPWPNGNITYENLSQMAHWLDIK------ANEFILTYIYMRLK 256
              .:|...|.|.         |.....|.||   |:....|..::      :..|...|..:|..
  Fly   375 DEVVVVYAPDFLKNLSDIILKMEQTEEGKIT---LNNYLVWQAVRTLTSCLSKPFRDAYKGVRKA 436

  Fly   257 LVAEGVSTESWHIDRDQCAEQSRQILSHPAAWLVEKNHPRLKEEPVLQDIFAELKQRFGQKLLAN 321
            |:......|.|.    .|...:..::......:..:.....:.:|..:.:.||:::.|..    |
  Fly   437 LMGSDGGEEIWR----YCVSDTNNVVGFAVGAIFVRQAFHGESKPAAEQMIAEIREAFKM----N 493

  Fly   322 RNNFT---RSTQHFLLGKLKRMRLRLSILPRNSSAQSMVR---------RIERHYRDVHMNASDY 374
            ..|.|   :.|:...:.|..::             ..|:.         .:::.|.::::..:.|
  Fly   494 LQNLTWVDKQTREKAIEKANQI-------------SDMIGFPDYILDPVELDKKYAELNITPNAY 545

  Fly   375 F-GNLHIGLNHSRSHKKYAQLWAIVFGRQLIPSRISKSD--LYPTQVRGYGTYASAFYIVKQNML 436
            | .|:.:.:.:.:|:.|            .:...::|::  :.|..|       :|:|...:|.:
  Fly   546 FENNIQVAIYNLKSNLK------------RLDQPVNKTNWGMTPQTV-------NAYYTPTKNQI 591

  Fly   437 IVPLSLLEPPFYTHGQPSILTYSALGFILGHELSHGFDSEGMTFSSHGVGSSAVDRELDRN--PR 499
            :.|..:|:.||:....|..|.:.|:|.::||||:|.||.:|..:...|    .::|..|..  .|
  Fly   592 VFPAGILQTPFFDINNPKSLNFGAMGVVMGHELTHAFDDQGREYDKFG----NINRWWDSKSIER 652

  Fly   500 FQQELGCLRRRF-----------GRKRY-EKFADASGLELAYSAYFDTAQTDHKRNRSAEEL--- 549
            |.::..|:.|::           |::.. |..||..||:.||.||..|     |.:|..:.|   
  Fly   653 FNEKSECIARQYSGYKMNGRTLNGKQTLGENIADNGGLKAAYHAYQRT-----KSDRDVDILKLP 712

  Fly   550 ---VTQKQQFFHNFAQFFCS----DKELLQAH--DHGSDRKRVNDAVAHFEPFREAFSCGPSPR- 604
               :|..|.||.:|||.:||    :..|||..  .|...:.||...:::.:.|.|.|.|.|..| 
  Fly   713 GLNLTHSQLFFVSFAQVWCSSTTDETNLLQMEKDPHSPSQFRVIGTLSNMKEFAEVFQCKPGKRM 777

  Fly   605 --RRQCRLY 611
              ..:|.::
  Fly   778 NPTEKCEVW 786

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
frmaNP_572226.2 GluZincin 25..601 CDD:301352 135/709 (19%)
Nep3NP_001245775.1 M13 123..784 CDD:189000 137/720 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454911
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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