DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment frma and Nepl3

DIOPT Version :9

Sequence 1:NP_572226.2 Gene:frma / 31464 FlyBaseID:FBgn0029769 Length:611 Species:Drosophila melanogaster
Sequence 2:NP_608904.1 Gene:Nepl3 / 326172 FlyBaseID:FBgn0031678 Length:629 Species:Drosophila melanogaster


Alignment Length:634 Identity:108/634 - (17%)
Similarity:203/634 - (32%) Gaps:172/634 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 QADPCQNFYKVACGN--WSA-SHATDSYESFMDRLDYNYQEKLADLLDNEREDDEPH-FLQQLRN 84
            :.:||.|||..:..|  |.| :..:|.::...|.:              |.|..|.| |.::|:.
  Fly    41 KVEPCHNFYNSSQKNLKWHAFATVSDQFQLLFDGI--------------ENEVFEKHSFEEKLQR 91

  Fly    85 FYTACRKPLSQDQVLRILEHLIVMENIQNEELSV--GLTAAFRLQVLIDLNDSNTYDIWKQLMSH 147
            .|..| ..:.:..:||..|.:...|::....|:.  |.....:.|             |.:.::.
  Fly    92 LYKIC-STMERPSLLRYFELVKPGEDLNWPFLTPRGGKWPKEKFQ-------------WMEALAR 142

  Fly   148 RKHW-------------DPNTTNREPLT--REMFDKLW---ASLPKIPFPFKEYYWRELSELEEK 194
            .:.:             |||:.:.:|:.  .:.:|.|:   .||..|..|.|  ..:|::.|:..
  Fly   143 LRRYGFNDIMFGMSIRQDPNSDSGQPIVVFEKKYDSLFRFIESLQNIGLPPK--LAKEIAPLDNA 205

  Fly   195 IMSYGSEDDGFD------------------------------------SGDLVTRIPPFWMMPWP 223
            |......|..|:                                    |.|.|..:...:.:...
  Fly   206 IQEMYKSDMKFEHYARDAAPVKRISLGQLEIYGVSLTKYLEIVFGRPFSPDFVVHVENLYYLRGL 270

  Fly   224 NGNITYENLSQMAHWLDIKANEFILTYIYMRLKLVAEGVSTESWHIDRDQCAEQSRQILSHPAAW 288
            ...:|......:|::|..:.: |.:.:.:|:               ..|.|....||.:...:..
  Fly   271 QNLMTAVPSQVVANYLTARFS-FYIMFTFMK---------------HGDSCVTTMRQSMEFASNL 319

  Fly   289 LVEKNHPRLKEEPVLQD----IFAELKQRFGQKLLANRNNFTRSTQHFLLGKLKRMRLRLSILPR 349
            |.|:.....|:....|:    ||..::|:...:|..|......:....|..||..:.|.:..||.
  Fly   320 LFEERILGRKKLRSYQNQAGKIFDAIRQQLNIRLERNVLKLPPAEISLLQKKLNGLSLSIGNLPG 384

  Fly   350 NSSAQSMVRRIERHYRDVHMNASDYFGNLHIGLNHSRSHKKYAQLWAIVF--GRQLIPSRISKSD 412
            .:..:   |.:.|:|:::.....:.....|:.:...|:..:.:.|....|  .|.::.|      
  Fly   385 KAGHR---RFVTRYYKELEFADDEELATAHLKVLEHRTRAELSLLDQPNFKDRRYMLHS------ 440

  Fly   413 LYPTQVRGYGTYASAFYIVKQNMLIVPLSLLEPPFYTHGQPSILTYSALGFILGHELSHGF---- 473
             ||..    ..:....|....|.:.|....|....:......|...:.||...|.|:...|    
  Fly   441 -YPIS----NFFFETAYEENGNTIYVAYDFLADASFDPDSHDIFKVTPLGIRFGLEMLKSFDLFN 500

  Fly   474 -------------DSEGMTFSSHGVGSSAVDRELDRNPRFQQELGCLRRRFGRKRYEKFADASGL 525
                         |::..|.....|.:...|..|.:..::                     ...|
  Fly   501 CKHHKVNMLQLFDDNQITTAGDECVSAWTQDNLLSQRDQY---------------------LVVL 544

  Fly   526 ELAYSAYFDTAQTDHKRNRSAEELVTQKQQFFHNFAQ-------FFCSD 567
            .|.:.|||.......:|..:...: :.::.||..|.|       :|.||
  Fly   545 HLVHEAYFAEGSKFSQRQPNFTTM-SLRELFFFRFGQSSFGQTLYFGSD 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
frmaNP_572226.2 GluZincin 25..601 CDD:301352 108/633 (17%)
Nepl3NP_608904.1 GluZincin 42..581 CDD:301352 104/620 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454864
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006719
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.840

Return to query results.
Submit another query.