DRSC/TRiP Functional Genomics Resources

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Protein Alignment frma and Nep1

DIOPT Version :9

Sequence 1:NP_572226.2 Gene:frma / 31464 FlyBaseID:FBgn0029769 Length:611 Species:Drosophila melanogaster
Sequence 2:NP_001284925.1 Gene:Nep1 / 31547 FlyBaseID:FBgn0029843 Length:849 Species:Drosophila melanogaster


Alignment Length:717 Identity:144/717 - (20%)
Similarity:262/717 - (36%) Gaps:217/717 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 ADPCQNFYKVACGNWSASHATDSYESFMDRLDYNYQEKLAD--------LLDNEREDDEPHFLQQ 81
            :|||::|::.|||.|:..|....     ||...:..|.|:|        :|:...::.:.....:
  Fly   193 SDPCEDFFQYACGTWNKMHPIPE-----DRSSISTFEVLSDQQQVILRAVLEEPIDERDNKATIK 252

  Fly    82 LRNFYTACRKPLSQDQVLRILEHLIVMENIQNEELSVGLTAAFRL-QVLIDLNDSNTYDIWKQLM 145
            .:.|:.:|                  |:..|..::..|     || |||..|..      |..: 
  Fly   253 AKTFFKSC------------------MDIPQIRKIGTG-----RLKQVLQSLGG------WPVI- 287

  Fly   146 SHRKHWDP-------------NTTNREPLTREMF---------------DKLWASLPKIPFPFKE 182
              .::|.|             .....||:..|::               |:|..:||.     ::
  Fly   288 --ERNWSPPADLSVERLMGQLRLNYSEPVMIELYVGADDKNSSVNILQMDQLQYALPS-----RD 345

  Fly   183 YYWRELS---------------------------ELEEKIMSYGS--------EDDGFDSGDLVT 212
            ||.:|.|                           || ||::.:.:        |.|..|: .||.
  Fly   346 YYLKESSANDRRAYHRYMTQVALLLGADPATAAAEL-EKVVLFETQLVNVSLPEADRHDT-SLVY 408

  Fly   213 R---IPPFW-MMPWPNGNITYENLSQMA--HWLDIKANEFILTYIYMRL----KLVAEGVSTESW 267
            |   :|... ::|    .:.::...|.|  ..:.::.:|.::||....|    |::|        
  Fly   409 RKMLLPELQELVP----EVQWQEYLQAALGPGIPLQEDEPLVTYGLHYLTEMGKILA-------- 461

  Fly   268 HIDRDQCAEQS--RQILSHPAAWLVEKNHPRLKEEPVLQDIFAELKQRFGQ-------KL----- 318
            |.||.......  |.::|..:..:.|....|::...:|..|.:| :.|:.|       ||     
  Fly   462 HTDRRVVHNYMLWRLVMSLMSHMIDEYQRERVEFRKILMGIQSE-RTRWSQCVEWTNKKLGVAVG 525

  Fly   319 -LANRNNFTRSTQHFLLGKLKRMRLRLS-ILPRNSSAQSMVRRIERHYRDVHMNASDYFGNLHIG 381
             |..|:||.:.::...|..:..:|...: :|..|.......|.:.:...|   :.::..|...:.
  Fly   526 ALFIRDNFNQESKEVALEMIHTIRAAFNELLAENDWMDDETRAVAKEKAD---SMNERIGYPELL 587

  Fly   382 LNHSRSHKKYAQLWAIVFGRQLIPSRISKSDL---------------YPTQVRGYGT---YASAF 428
            .|.:...::|..|       .::|.....:.|               .|.....:.|   ..:||
  Fly   588 TNATELEQEYVNL-------TIVPDNFINNVLSILQWESEKMLRLLRQPVDKEKWTTEPAVVNAF 645

  Fly   429 YIVKQNMLIVPLSLLEPPFYTHGQPSILTYSALGFILGHELSHGFDSEGMTFSSHG-----VGSS 488
            |...:|.::.|..:|:|.||:...|..|.|..:|.::|||::||||.:|..|...|     ..::
  Fly   646 YNPNKNDIVFPAGILQPLFYSQHFPKSLNYGGIGVVIGHEITHGFDDKGRQFDKEGNMMQWWNNA 710

  Fly   489 AVDRELDRNPRFQQELGCLRRRFGRKRY--------------EKFADASGLELAYSAYFDTAQTD 539
            .::       .|::...|:..::.|.:.              |..||..||:.|:.|| ...:|.
  Fly   711 TIE-------AFRERTQCVIDQYSRYKINEVDMFMDGRMTQGENIADNGGLKQAFRAY-KKWETL 767

  Fly   540 HKRNRSAEEL-VTQKQQFFHNFAQFFCSDKE------LLQAHDHGSDRKRVNDAVAHFEPFREAF 597
            |.|.:....| :|..|.||.|:||.:|....      .:::..|.....||...:::...|..|:
  Fly   768 HGREQQLPGLNMTHDQLFFLNYAQIWCGSMRPEDALTKIRSAVHSPGFVRVLGPLSNSRDFASAY 832

  Fly   598 SC 599
            .|
  Fly   833 KC 834

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
frmaNP_572226.2 GluZincin 25..601 CDD:301352 144/717 (20%)
Nep1NP_001284925.1 M13 194..847 CDD:189000 144/716 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45469692
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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