DRSC/TRiP Functional Genomics Resources

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Protein Alignment frma and Mmel1

DIOPT Version :10

Sequence 1:NP_572226.2 Gene:frma / 31464 FlyBaseID:FBgn0029769 Length:611 Species:Drosophila melanogaster
Sequence 2:NP_038811.2 Gene:Mmel1 / 27390 MGIID:1351603 Length:766 Species:Mus musculus


Alignment Length:750 Identity:157/750 - (20%)
Similarity:266/750 - (35%) Gaps:244/750 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 DPCQNFYKVACGNWSASHA---TDSYESFMDRLDYNYQEKLADLLDNEREDDEPHFLQQLRNFYT 87
            :||:|||:.|||.|...|.   |:|..|..|.|....:..|..:|::......| .:::.:..|.
Mouse    97 NPCENFYQYACGGWLRHHVIPETNSRYSVFDILRDELEVILKGVLEDSTSQHRP-AVEKAKTLYR 160

  Fly    88 AC----------RKPLSQDQVLRILEHLIVMENIQNE----------ELSVGLTAAFRLQVLIDL 132
            :|          .:||.  .||:::....|..:..||          :|:| |.:.|..:|||||
Mouse   161 SCMNQSVIEKRDSEPLL--SVLKMVGGWPVAMDKWNETMGLKWELERQLAV-LNSQFNRRVLIDL 222

  Fly   133 NDSNTYDIWKQLMSHRKHWDPNTTNREPLTREMFDKLWASLPKIPFPFKEYYWRE---------L 188
                  .||....:..:|                 .::...|.:..|.:|||::|         .
Mouse   223 ------FIWNDDQNSSRH-----------------VIYIDQPTLGMPSREYYFQEDNNHKVRKAY 264

  Fly   189 SELEEKIMSYGSEDDGFDSGDLVTRIPPFWMMPWPNGNITYENLSQMAHWLDIK---ANEFI--- 247
            .|....:.:...:|........:.|                   .:||..|:::   ||..:   
Mouse   265 LEFMTSVATMLRKDQNLSKESAMVR-------------------EEMAEVLELETHLANATVPQE 310

  Fly   248 ----LTYIYMRLKLV----AEGVSTESWHIDRDQCAEQSRQILSHPAAWLVEKNHPRLKEEPVLQ 304
                :|.:|.|:.|:    ..|:...:|.: ..|....|.::...|...:|....|.|:.   |:
Mouse   311 KRHDVTALYHRMDLMELQERFGLKGFNWTL-FIQNVLSSVEVELFPDEEVVVYGIPYLEN---LE 371

  Fly   305 DI---------------------FAELKQRFGQKLLANRN----------------NFTRSTQHF 332
            ||                     ...|.|||.:..:..|.                ::..|....
Mouse   372 DIIDSYSARTMQNYLVWRLVLDRIGSLSQRFKEARVDYRKALYGTTVEEVRWRECVSYVNSNMES 436

  Fly   333 LLGKL--KRMRLRLSILPRNSSAQSMVRRI---------ERHYRDVH---------MNASDYFG- 376
            .:|.|  ||...:.|    .|:.:.::.:|         |.::.|..         ||..:..| 
Mouse   437 AVGSLYIKRAFSKDS----KSTVRELIEKIRSVFVDNLDELNWMDEESKKKAQEKAMNIREQIGY 497

  Fly   377 --------NLHI-----------------GL-----NHSRSHKKYAQ-----LWAIVFGRQLIPS 406
                    |.|:                 ||     |..||.||..:     ||  :.|..::  
Mouse   498 PDYILEDNNKHLDEEYSSLTFYEDLYFENGLQNLKNNAQRSLKKLREKVDQNLW--IIGAAVV-- 558

  Fly   407 RISKSDLYPTQVRGYGTYASAFYIVKQNMLIVPLSLLEPPFYTHGQPSILTYSALGFILGHELSH 471
                               :|||...:|.::.|..:|:|||::..||..|.:..:|.::|||::|
Mouse   559 -------------------NAFYSPNRNQIVFPAGILQPPFFSKDQPQSLNFGGIGMVIGHEITH 604

  Fly   472 GFDSEGMTFSSHGVGSSAVDRELDRNPR-FQQELGCLRRRFGRKRY---------------EKFA 520
            |||..|..|..:|   :.:|...:.:.| |||:..|:..::|...:               |..|
Mouse   605 GFDDNGRNFDKNG---NMLDWWSNFSARHFQQQSQCMIYQYGNFSWELADNQNVNGFSTLGENIA 666

  Fly   521 DASGLELAYSAYFDTAQTDHKRNRSAEELVTQKQQFFHNFAQFFCSD------KELLQAHDHGSD 579
            |..|:..||.||........|..|.....:|..|.||.|:||.:|..      .:.::...|...
Mouse   667 DNGGVRQAYKAYLRWLADGGKDQRLPGLNLTYAQLFFINYAQVWCGSYRPEFAVQSIKTDVHSPL 731

  Fly   580 RKRVNDAVAHFEPFREAFSC---GPSPRRRQCRLY 611
            :.||..::.:...|.|||.|   .|....::||::
Mouse   732 KYRVLGSLQNLPGFSEAFHCPRGSPMHPMKRCRIW 766

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
frmaNP_572226.2 GluZincin 25..601 CDD:472708 154/738 (21%)
Mmel1NP_038811.2 M13 97..764 CDD:341056 155/746 (21%)

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