DRSC/TRiP Functional Genomics Resources

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Protein Alignment frma and Phex

DIOPT Version :9

Sequence 1:NP_572226.2 Gene:frma / 31464 FlyBaseID:FBgn0029769 Length:611 Species:Drosophila melanogaster
Sequence 2:NP_037136.2 Gene:Phex / 25512 RGDID:3323 Length:749 Species:Rattus norvegicus


Alignment Length:751 Identity:164/751 - (21%)
Similarity:283/751 - (37%) Gaps:207/751 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ELIVGLLVVQVKSHPQADPCQNFYKVACGNWSASHA----TDSYESFMDRLDYNYQEKLADLLD- 68
            |.|.....:..|.:...|||:||::.||..|.:::.    ..||..: ..|.:|...||..||: 
  Rat    58 ECIEAAAAIMSKVNLSVDPCENFFRFACDGWISNNPIPEDMPSYGVY-PWLRHNVDLKLKALLEK 121

  Fly    69 --NEREDDEPHFLQQLRNFYTAC----------RKPLSQDQVLR-------ILEHLIVMENIQNE 114
              :.|.|.|.  :|:.:..|::|          .|||.  .:||       :||..|..|.:.:|
  Rat   122 SVSRRRDTEA--VQKAKILYSSCMNEKAIEKADAKPLL--HILRHSPFRWPVLEANIGPEGVWSE 182

  Fly   115 -ELSVGLTAA-----------FRLQVLIDLNDSNTY----DIWKQLMSHRKHWDPNTTN----RE 159
             :.|:..|.|           .||.|..|...||.:    |.....::.|:.:..|||.    |:
  Rat   183 RKFSLLQTLATFRGQYSNSVFIRLYVSPDDKASNEHILKLDQATLSLAVREDFLDNTTEAKSYRD 247

  Fly   160 PLTREMFD--------------------KLWASLPKIPFPFKE------YYWRELSELE------ 192
            .|.:.|.|                    :|...:.:|..|.:.      |....:|||.      
  Rat   248 ALYKFMVDTAVLLGANSSRAEHDMKSVLRLEIKIAEIMIPHENRTSEAMYNKMNISELSAMIPQF 312

  Fly   193 ------EKIMS---YGSEDDGFDSGDLVTRIPPF---------------------WMMPWPNGNI 227
                  :|::.   |....|...|.::|.|:|.:                     |.|.:..   
  Rat   313 DWLGYIKKVIDTRLYPHLKDIGPSENVVVRVPQYFKDLFRILGAERKKTIANYLVWRMVYSR--- 374

  Fly   228 TYENLSQMAHWLDIKANEFILTYIYMRLKLVAEGVST--ESWHIDRDQCAEQSRQILSHPAAWLV 290
             ..|||:.            ..|.::....|.:|.:|  ..|    |:|.......|.:....:.
  Rat   375 -IPNLSRR------------FQYRWLEFSRVIQGTTTLLPQW----DKCVNFIESALPYVVGKMF 422

  Fly   291 EKNHPRLKEEPVLQDIFAELKQRFGQKLLANRNNFTRSTQHFLLGKLKRMRLRLSILPRNSSAQS 355
            ...|.:..::.:::::...::..|...|..........|      |.|......::|.:....:.
  Rat   423 VNVHFQEDKKEMMEELIEGVRWAFIDMLEKENEWMDAGT------KRKAQEKARAVLAKVGYPEF 481

  Fly   356 MVR--RIERHYRDVHMNASDYFGNLHIGLNHSRSHKKYAQ---LWAIVFGRQLIPSRISKSDLY- 414
            ::.  .:....:.:..:.||||||:      .::.|..||   .|.    |:.:|    |::.: 
  Rat   482 IMNDTYVNEDLKAIKFSESDYFGNV------LQTRKYLAQSDFFWL----RKAVP----KTEWFT 532

  Fly   415 -PTQVRGYGTYASAFYIVKQNMLIVPLSLLEPPFYTHGQ-PSILTYSALGFILGHELSHGFDSEG 477
             ||.|       :|||....|.:..|...|:.||:...: |..|:|.|:|.|:|||.:||||:.|
  Rat   533 NPTTV-------NAFYSASTNQIRFPAGELQKPFFWGTEYPRSLSYGAIGVIVGHEFTHGFDNNG 590

  Fly   478 MTFSSHGVGSSAVDR--ELDRNPRFQQELGCLRRRFG--------------RKRYEKFADASGLE 526
            ..:..:|    .:|.  .:|...:|:::..|:..::.              |...|..||..||.
  Rat   591 RKYDKNG----NLDPWWSVDSEEKFKEKTKCMINQYSNYYWKKAGLNVKGKRTLGENIADNGGLR 651

  Fly   527 LAYSAYFDTAQTDHKRNRSAEE------LVTQKQQFFHNFAQFFCSD------KELLQAHDHGSD 579
            .|:.||   .:..:.|.:..||      ..|..|.||.::|...|:.      :|.:|...|...
  Rat   652 EAFRAY---RKWINDRRQGVEEPLLPGITFTNNQLFFLSYAHVRCNSYRPEAAREQVQIGAHSPP 713

  Fly   580 RKRVNDAVAHFEPFREAFSCGPSPRRRQ----CRLY 611
            :.|||.|:::||.|::||:|..:....:    |||:
  Rat   714 QFRVNGAISNFEEFQKAFNCPANSTMNRGADSCRLW 749

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
frmaNP_572226.2 GluZincin 25..601 CDD:301352 158/719 (22%)
PhexNP_037136.2 M13 74..740 CDD:341056 158/724 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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