DRSC/TRiP Functional Genomics Resources

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Protein Alignment frma and nep-24

DIOPT Version :9

Sequence 1:NP_572226.2 Gene:frma / 31464 FlyBaseID:FBgn0029769 Length:611 Species:Drosophila melanogaster
Sequence 2:NP_503005.3 Gene:nep-24 / 190993 WormBaseID:WBGene00013786 Length:567 Species:Caenorhabditis elegans


Alignment Length:610 Identity:116/610 - (19%)
Similarity:191/610 - (31%) Gaps:208/610 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 PQADPCQNFYKVACGNWSASHATDSYESFMDRLDYNYQEKLADLLDNEREDDEPHFLQQLRNFYT 87
            |..|||.||::.|||. ...|.|:...:...:...|..::.....:..|...|    ..:|..|.
 Worm    56 PSVDPCDNFHQFACGR-EHEHETEDIYTKKTKTINNIMKRFLKKNETSRSKSE----NAMRTLYK 115

  Fly    88 ACRK--------------------------PLSQDQ--------------VLRI------LEHLI 106
            ||:.                          |:..|:              ::|:      |..:.
 Worm   116 ACKTLEKNSTASRNKALQDIFQDIQSIGAWPVVDDKWDESKFDLNDFLVNLVRLGRKNFGLFQMA 180

  Fly   107 VMENIQNEELSVGLTAAFRLQVLIDLNDSNTYDIWKQLMSHRKHWDPNTTNREPLTREMFDKL-- 169
            ...|::|  .::|..||:|..|          |:.|.:....|.....|.|     :::.|.|  
 Worm   181 RYVNVRN--FAIGPEAAWRHNV----------DLGKTISEILKANSVQTNN-----KKLLDDLAE 228

  Fly   170 WASLPKIPFPFK------EYYWRELSELEEKIMSYGSEDDGFD-------SGDLVTRIPPFWMMP 221
            :.:|.|.....|      .|.:.|.|:....:        .|.       |.|..|..|..:.:.
 Worm   229 YVNLEKALSQHKFNTVQPGYIFSERSDFVSSV--------NFSRLVLEMMSPDKRTLFPEVYQIM 285

  Fly   222 W---------PNGNI--TYENLSQMAHWLDIKANEFILTYIYMRLKLVAEGVSTESWHIDRDQCA 275
            :         .|.|:  ...|.|:.|     .||..|..:|...:..:..|              
 Worm   286 YLTNTSLFFGKNNNLETIIRNTSKRA-----LANYLIFKFIDTSIADLTYG-------------- 331

  Fly   276 EQSRQILSHPAAWLVEKNHPRLKEEPVLQDIFAELKQRFGQKLLANRN-----NFTRSTQHFLL- 334
                    .|:|:.         |:.|:..:.....:.|.:..::..|     ..|.:||..|| 
 Worm   332 --------SPSAFC---------EQKVINFLPRAALRAFYRNFISKENRKKITKLTEATQVQLLK 379

  Fly   335 --GKLKRMRLR-LSILPRNSSAQSMVRRIERHYRDVHMNASDYF---GNL-----HIGLNHSRSH 388
              |....|.:: ..|.....|:.:||           :...|||   |.|     |:.|:.|.::
 Worm   380 IIGATDWMSIKSKKIAMDRVSSMNMV-----------IGYPDYFDPPGKLDGLFEHLNLSSSDTY 433

  Fly   389 KKYAQLWAIV-----FGRQLIPSRISKSDLYPTQVRGY----GTYASAFYIVKQNMLIVPLSLLE 444
                  :.:|     |.|:      .:.|.|..:|..|    |...:|.|....|.|::.....:
 Worm   434 ------YTVVRKINRFMRE------QEMDYYTGEVPYYPLFPGLMTNAMYNANDNNLMIFAPFFD 486

  Fly   445 PPFYTHGQPSILTYSALGFILGHELSHGFDSEGMTFSSHGVGSSAVDRELDRNPRFQQELGCLRR 509
            .||:....|.....:.....|.||:.|       |||.|.:.......|:...|:..:|      
 Worm   487 DPFFDSSFPDYANIAFTSNTLAHEMGH-------TFSPHLMDIMTGTTEVWLTPKETEE------ 538

  Fly   510 RFGRKRYEKFADASGLELAYSAYFD 534
                  |||....  ||..|:.|.|
 Worm   539 ------YEKRVKC--LEDQYTEYDD 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
frmaNP_572226.2 GluZincin 25..601 CDD:301352 115/608 (19%)
nep-24NP_503005.3 GluZincin 58..561 CDD:301352 115/608 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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